Aniseed - Gene card

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Genoscope Yasuo Villefranche

45 results

AHC0AAA267YB18

Plate: Plate_267_B18

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Fibrillarin	SMART	Fibrillarin
Fibrillarin	PIRSF	Fibrillarin
SAM-dependent_MTases	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferase
Fibrillarin	PRINTS	Fibrillarin
Fibrillarin	Pfam	Fibrillarin
Fibrillarin_CS	ProSitePatterns	Fibrillarin, conserved site
Fibrillarin	Hamap	Fibrillarin

GOSlim

19 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
RNA processing	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
cell differentiation	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
metabolic process	Orthology	biological process
nuclear body	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Orthology	molecular function
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
box C/D snoRNA 3'-end processing	Hs	biological process
TFIID-class transcription factor binding	Hs	molecular function
osteoblast differentiation	Hs	biological process
fibrillar center	Hs	cellular component
dense fibrillar component	Hs	cellular component
granular component	Hs	cellular component
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
rRNA processing	Hs	biological process
tRNA processing	Hs	biological process
methyltransferase activity	Hs	molecular function
rRNA methyltransferase activity	Hs	molecular function
Cajal body	Hs	cellular component
membrane	Hs	cellular component
transferase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
rRNA methylation	Hs	biological process
box C/D snoRNP complex	Hs	cellular component
small-subunit processome	Hs	cellular component
methylation	Hs	biological process
ATPase binding	Hs	molecular function
extracellular exosome	Hs	cellular component
histone glutamine methylation	Hs	biological process
histone-glutamine methyltransferase activity	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
TFIID-class transcription factor binding	Hs	molecular function	422	1.85e-149
fibrillar center	Hs	cellular component	422	1.85e-149
dense fibrillar component	Hs	cellular component	422	1.85e-149
granular component	Hs	cellular component	422	1.85e-149
RNA binding	Hs	molecular function	422	1.85e-149
protein binding	Hs	molecular function	422	1.85e-149
nucleus	Hs	cellular component	422	1.85e-149
nucleoplasm	Hs	cellular component	422	1.85e-149
chromosome	Hs	cellular component	422	1.85e-149
nucleolus	Hs	cellular component	422	1.85e-149
methyltransferase activity	Hs	molecular function	422	1.85e-149
rRNA methyltransferase activity	Hs	molecular function	422	1.85e-149
Cajal body	Hs	cellular component	422	1.85e-149
membrane	Hs	cellular component	422	1.85e-149
transferase activity	Hs	molecular function	422	1.85e-149
intracellular ribonucleoprotein complex	Hs	cellular component	422	1.85e-149
box C/D snoRNP complex	Hs	cellular component	422	1.85e-149
small-subunit processome	Hs	cellular component	422	1.85e-149
ATPase binding	Hs	molecular function	422	1.85e-149
extracellular exosome	Hs	cellular component	422	1.85e-149
histone-glutamine methyltransferase activity	Hs	molecular function	422	1.85e-149

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
RNA binding	SMART	molecular function	1.7E-171
rRNA processing	SMART	biological process	1.7E-171
methyltransferase activity	SMART	molecular function	1.7E-171

Gene Card

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Transcript Models and Sequences