- Gene 'Phmamm.CG.MTP2014.S9...'
Gene Card
Best human hits
CLVS1; RLBP1; TTPAL
Species
Unique Gene ID
Phmamm.g00012684
Gene Model ID
Phmamm.CG.MTP2014.S902.g12684
Location
S902:55209..57395
Transcript Models and Sequences
Genoscope Yasuo Villefranche
11 results
AHC0AAA15YM11
Plate: Plate_15_M11
AHC0AAA48YI05
Plate: Plate_48_I05
AHC0AAA68YH06
Plate: Plate_68_H06
AHC0AAA105YO05
Plate: Plate_105_O05
AHC0AAA129YH09
Plate: Plate_129_H09
AHC0AAA131YM05
Plate: Plate_131_M05
AHC0AAA156YN09
Plate: Plate_156_N09
AHC0AAA91YA14
Plate: Plate_91_A14
AHC0AAA171YK09
Plate: Plate_171_K09
AHC0AAA257YN18
Plate: Plate_257_N18
AHC0AAA261YH22
Plate: Plate_261_H22
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| CRAL-TRIO_dom | Pfam | CRAL-TRIO lipid binding domain |
| CRAL/TRIO_N_dom | SMART | CRAL/TRIO, N-terminal domain |
| CRAL-TRIO_dom | CDD | CRAL-TRIO lipid binding domain |
| CRAL/TRIO_N_dom_sf | SUPERFAMILY | CRAL/TRIO, N-terminal domain superfamily |
| CRAL-TRIO_dom_sf | Gene3D | CRAL-TRIO lipid binding domain superfamily |
| RLBP1 | PANTHER | Retinaldehyde-binding protein 1 |
| CRAL/TRIO_N_dom | Pfam | CRAL/TRIO, N-terminal domain |
| CRAL-TRIO_dom | ProSiteProfiles | CRAL-TRIO lipid binding domain |
| CRAL-TRIO_dom_sf | SUPERFAMILY | CRAL-TRIO lipid binding domain superfamily |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| cytoplasm | Orthology | cellular component |
| endosome | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytosol | Orthology | cellular component |
| visual perception | Orthology | biological process |
| membrane | Blast | cellular component |
| cytoplasmic vesicle | Blast | cellular component |
| cell body | Orthology | cellular component |
| response to stimulus | Orthology | biological process |
| cellular metabolic process | Orthology | biological process |
| organic substance metabolic process | Orthology | biological process |
| small molecule binding | Orthology | molecular function |
| Golgi apparatus part | Blast | cellular component |
| binding | Blast | molecular function |
| whole membrane | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| early endosome | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| Golgi membrane | Blast | cellular component |
| anion binding | Blast | molecular function |
GO (Orthology)
10 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| retinoid metabolic process | Hs | biological process |
| 11-cis retinal binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| vitamin A metabolic process | Hs | biological process |
| visual perception | Hs | biological process |
| retinal binding | Hs | molecular function |
| retinol binding | Hs | molecular function |
| cell body | Hs | cellular component |
| response to stimulus | Hs | biological process |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| 11-cis retinal binding | Hs | molecular function | 239 | 6.84e-79 |
| cytoplasm | Hs | cellular component | 239 | 6.84e-79 |
| endosome | Hs | cellular component | 129 | 1.88e-35 |
| Golgi apparatus | Hs | cellular component | 129 | 1.88e-35 |
| trans-Golgi network | Hs | cellular component | 129 | 1.88e-35 |
| cytosol | Hs | cellular component | 239 | 6.84e-79 |
| lipid binding | Hs | molecular function | 129 | 1.88e-35 |
| membrane | Hs | cellular component | 139 | 1.05e-39 |
| retinal binding | Hs | molecular function | 239 | 6.84e-79 |
| retinol binding | Hs | molecular function | 239 | 6.84e-79 |
| clathrin-coated vesicle | Hs | cellular component | 129 | 1.88e-35 |
| cytoplasmic vesicle | Hs | cellular component | 129 | 1.88e-35 |
| early endosome membrane | Hs | cellular component | 129 | 1.88e-35 |
| trans-Golgi network membrane | Hs | cellular component | 129 | 1.88e-35 |
| cell body | Hs | cellular component | 239 | 6.84e-79 |
| phosphatidylinositol-3,5-bisphosphate binding | Hs | molecular function | 129 | 1.88e-35 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| visual perception | PANTHER | biological process | 2.9E-95 |
| retinal binding | PANTHER | molecular function | 2.9E-95 |
