Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S8...'

Gene Card

Best human hits

GARS

Species

P.mammillata

Unique Gene ID

Phmamm.g00012453

Gene Model ID

Phmamm.CG.MTP2014.S865.g12453

Location

S865:1309..3543

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S865.g12453.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

24 results

AHC0AAA22YE07

Plate: Plate_22_E07

AHC0AAA23YD05

Plate: Plate_23_D05

AHC0AAA6YE18

Plate: Plate_6_E18

AHC0AAA6YO19

Plate: Plate_6_O19

AHC0AAA35YD04

Plate: Plate_35_D04

AHC0AAA47YO13

Plate: Plate_47_O13

AHC0AAA75YC04

Plate: Plate_75_C04

AHC0AAA102YF02

Plate: Plate_102_F02

AHC0AAA106YJ01

Plate: Plate_106_J01

AHC0AAA108YK15

Plate: Plate_108_K15

AHC0AAA112YA02

Plate: Plate_112_A02

AHC0AAA145YO07

Plate: Plate_145_O07

AHC0AAA99YE09

Plate: Plate_99_E09

AHC0AAA106YL03

Plate: Plate_106_L03

AHC0AAA176YJ08

Plate: Plate_176_J08

AHC0AAA177YL19

Plate: Plate_177_L19

AHC0AAA193YF13

Plate: Plate_193_F13

AHC0AAA195YC03

Plate: Plate_195_C03

AHC0AAA195YO01

Plate: Plate_195_O01

AHC0AAA198YI11

Plate: Plate_198_I11

AHC0AAA218YK08

Plate: Plate_218_K08

AHC0AAA221YG09

Plate: Plate_221_G09

AHC0AAA246YP03

Plate: Plate_246_P03

AHC0AAA263YK24

Plate: Plate_263_K24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Gly-tRNA_synthase/POLG2 PANTHER Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
Anticodon-bd_dom_sf Gene3D Anticodon-binding domain superfamily
WHEP-TRS_dom SMART WHEP-TRS domain
Anticodon-bd Pfam Anticodon-binding
tRNA-synt_gly PRINTS Glycyl-tRNA synthetase
WHEP-TRS_dom Pfam WHEP-TRS domain
WHEP-TRS_dom ProSiteProfiles WHEP-TRS domain
tRNA-synt_gly TIGRFAM Glycyl-tRNA synthetase

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular region Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Orthology cellular component
hydrolase activity Orthology molecular function
ligase activity Orthology molecular function
axon Orthology cellular component
identical protein binding Orthology molecular function
cell projection Orthology cellular component
protein dimerization activity Orthology molecular function
extracellular exosome Orthology cellular component
pyrophosphatase activity Orthology molecular function
RNA metabolic process Orthology biological process
phosphate-containing compound metabolic process Orthology biological process
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity Hs molecular function
aminoacyl-tRNA ligase activity Hs molecular function
glycine-tRNA ligase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
cytosol Hs cellular component
translation Hs biological process
tRNA aminoacylation for protein translation Hs biological process
glycyl-tRNA aminoacylation Hs biological process
diadenosine tetraphosphate biosynthetic process Hs biological process
hydrolase activity Hs molecular function
ligase activity Hs molecular function
secretory granule Hs cellular component
axon Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
protein dimerization activity Hs molecular function
extracellular exosome Hs cellular component
mitochondrial glycyl-tRNA aminoacylation Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 410 4.69e-134
bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity Hs molecular function 410 4.69e-134
aminoacyl-tRNA ligase activity Hs molecular function 410 4.69e-134
glycine-tRNA ligase activity Hs molecular function 410 4.69e-134
protein binding Hs molecular function 410 4.69e-134
ATP binding Hs molecular function 410 4.69e-134
extracellular region Hs cellular component 410 4.69e-134
cytoplasm Hs cellular component 410 4.69e-134
mitochondrion Hs cellular component 410 4.69e-134
mitochondrial matrix Hs cellular component 410 4.69e-134
cytosol Hs cellular component 410 4.69e-134
hydrolase activity Hs molecular function 410 4.69e-134
ligase activity Hs molecular function 410 4.69e-134
secretory granule Hs cellular component 410 4.69e-134
axon Hs cellular component 410 4.69e-134
identical protein binding Hs molecular function 410 4.69e-134
cell projection Hs cellular component 410 4.69e-134
protein dimerization activity Hs molecular function 410 4.69e-134
extracellular exosome Hs cellular component 410 4.69e-134

GO (InterProScan)

7 results

GO Term Analysis Type e-value
nucleotide binding TIGRFAM molecular function 2.0E-95
aminoacyl-tRNA ligase activity Pfam molecular function 3.3E-7
glycine-tRNA ligase activity TIGRFAM molecular function 2.0E-95
ATP binding TIGRFAM molecular function 2.0E-95
cytoplasm TIGRFAM cellular component 2.0E-95
tRNA aminoacylation for protein translation Pfam biological process 3.3E-7
glycyl-tRNA aminoacylation TIGRFAM biological process 2.0E-95