- Gene 'Phmamm.CG.MTP2014.S8...'
Gene Card
Best human hits
KHDRBS2; QKI; SF1
Species
Unique Gene ID
Phmamm.g00002812
Gene Model ID
Phmamm.CG.MTP2014.S84.g02812
Location
S84:251315..256263
Transcript Models and Sequences
Phmamm.CG.MTP2014.S84.g02812.01.t
Phmamm.CG.MTP2014.S84.g02812.02.t
AHC0AAA10YE03
Plate: Plate_10_E03
AHC0AAA52YK12
Plate: Plate_52_K12
AHC0AAA60YF13
Plate: Plate_60_F13
AHC0AAA70YN21
Plate: Plate_70_N21
AHC0AAA72YL11
Plate: Plate_72_L11
AHC0AAA77YG04
Plate: Plate_77_G04
AHC0AAA101YG01
Plate: Plate_101_G01
AHC0AAA110YC06
Plate: Plate_110_C06
AHC0AAA132YL02
Plate: Plate_132_L02
AHC0AAA144YD22
Plate: Plate_144_D22
AHC0AAA86YA15
Plate: Plate_86_A15
AHC0AAA158YP18
Plate: Plate_158_P18
AHC0AAA163YN04
Plate: Plate_163_N04
AHC0AAA177YE11
Plate: Plate_177_E11
AHC0AAA181YA19
Plate: Plate_181_A19
AHC0AAA210YB15
Plate: Plate_210_B15
AHC0AAA226YO01
Plate: Plate_226_O01
AHC0AAA248YP06
Plate: Plate_248_P06
AHC0AAA250YA16
Plate: Plate_250_A16
AHC0AAA256YC22
Plate: Plate_256_C22
AHC0AAA266YE04
Plate: Plate_266_E04
n/a
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IPR Term | Analysis | Definition |
---|---|---|
KH_dom_type_1_sf | SUPERFAMILY | K Homology domain, type 1 superfamily |
Znf_CCHC | ProSiteProfiles | Zinc finger, CCHC-type |
KH_dom_type_1 | Pfam | K Homology domain, type 1 |
KH_dom | SMART | K Homology domain |
BBP/SF1 | PANTHER | BBP/SF1 family |
SF1-HH | Pfam | Splicing factor 1, helix-hairpin domain |
KH_dom_type_1_sf | Gene3D | K Homology domain, type 1 superfamily |
Znf_CCHC | SMART | Zinc finger, CCHC-type |
GO Term | Annotation Origin | Type |
---|---|---|
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
transcription corepressor activity | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
cytoplasm | Blast | cellular component |
ribosome | Orthology | cellular component |
transcription, DNA-templated | Orthology | biological process |
regulation of transcription, DNA-templated | Orthology | biological process |
mRNA processing | Orthology | biological process |
multicellular organism development | Orthology | biological process |
zinc ion binding | Orthology | molecular function |
RNA splicing | Orthology | biological process |
nuclear body | Orthology | cellular component |
identical protein binding | Orthology | molecular function |
metal ion binding | Orthology | molecular function |
protein heterodimerization activity | Blast | molecular function |
negative regulation of nucleic acid-templated transcription | Orthology | biological process |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
reproductive process | Orthology | biological process |
negative regulation of cell proliferation | Orthology | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
spliceosomal complex assembly | Hs | biological process |
mRNA 3'-splice site recognition | Hs | biological process |
mRNA splicing, via spliceosome | Hs | biological process |
nucleic acid binding | Hs | molecular function |
transcription corepressor activity | Hs | molecular function |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
ribosome | Hs | cellular component |
transcription, DNA-templated | Hs | biological process |
regulation of transcription, DNA-templated | Hs | biological process |
mRNA processing | Hs | biological process |
zinc ion binding | Hs | molecular function |
RNA splicing | Hs | biological process |
nuclear body | Hs | cellular component |
male sex determination | Hs | biological process |
identical protein binding | Hs | molecular function |
pre-mRNA branch point binding | Hs | molecular function |
metal ion binding | Hs | molecular function |
negative regulation of smooth muscle cell proliferation | Hs | biological process |
negative regulation of nucleic acid-templated transcription | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleic acid binding | Hs | molecular function | 433 | 1.15e-142 |
transcription corepressor activity | Hs | molecular function | 433 | 1.15e-142 |
RNA binding | Hs | molecular function | 433 | 1.15e-142 |
mRNA binding | Hs | molecular function | 91.7 | 6.54e-20 |
protein binding | Hs | molecular function | 433 | 1.15e-142 |
nucleus | Hs | cellular component | 433 | 1.15e-142 |
nucleoplasm | Hs | cellular component | 433 | 1.15e-142 |
spliceosomal complex | Hs | cellular component | 433 | 1.15e-142 |
cytoplasm | Hs | cellular component | 91.7 | 6.54e-20 |
ribosome | Hs | cellular component | 433 | 1.15e-142 |
poly(A) binding | Hs | molecular function | 77.8 | 2.80e-15 |
poly(U) RNA binding | Hs | molecular function | 77.8 | 2.80e-15 |
zinc ion binding | Hs | molecular function | 433 | 1.15e-142 |
nuclear body | Hs | cellular component | 433 | 1.15e-142 |
SH3 domain binding | Hs | molecular function | 91.7 | 6.54e-20 |
SH2 domain binding | Hs | molecular function | 77.8 | 2.80e-15 |
identical protein binding | Hs | molecular function | 433 | 1.15e-142 |
pre-mRNA branch point binding | Hs | molecular function | 433 | 1.15e-142 |
metal ion binding | Hs | molecular function | 433 | 1.15e-142 |
protein heterodimerization activity | Hs | molecular function | 77.8 | 2.80e-15 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
mRNA splicing, via spliceosome | PANTHER | biological process | 9.4E-141 |
nucleic acid binding | SMART | molecular function | 2.5E-12 |
RNA binding | PANTHER | molecular function | 9.4E-141 |
zinc ion binding | SMART | molecular function | 0.0053 |
pre-mRNA branch point binding | PANTHER | molecular function | 9.4E-141 |