Aniseed - Gene card

Gene Card

Best human hits

ATG3; FAHD2A; FAHD2B

Species

P.mammillata

Unique Gene ID

Phmamm.g00012080

Gene Model ID

Phmamm.CG.MTP2014.S807.g12080

Location

S807:61435..71110

Transcript Models and Sequences

Phmamm.CG.MTP2014.S807.g12080.01.t
Phmamm.CG.MTP2014.S807.g12080.02.t
Phmamm.CG.MTP2014.S807.g12080.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

30 results

AHC0AAA267YF18

Plate: Plate_267_F18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Fumarylacetoacetase_C_sf	SUPERFAMILY	Fumarylacetoacetase-like, C-terminal domain superfamily
Autophagy-rel_prot_3_N	Pfam	Autophagy-related protein 3, N-terminal
Fumarylacetoacetase_C_sf	Gene3D	Fumarylacetoacetase-like, C-terminal domain superfamily
Fumarylacetoacetase-like_C	Pfam	Fumarylacetoacetase-like, C-terminal
Autophagy-rel_prot_3	Pfam	Autophagy-related protein 3
Autophagy-rel_prot_3_C	Pfam	Autophagy-related protein 3, C-terminal

GOSlim

12 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
metabolic process	Orthology	biological process
transferase activity	Blast	molecular function
hydrolase activity	Orthology	molecular function
ubiquitin-like protein transferase activity	Blast	molecular function
enzyme binding	Blast	molecular function
metal ion binding	Orthology	molecular function
cytoplasmic part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

4 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
metabolic process	Hs	biological process
hydrolase activity	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytoplasmic ubiquitin ligase complex	Hs	cellular component	355	1.46e-119
catalytic activity	Hs	molecular function	328	3.88e-109
protein binding	Hs	molecular function	355	1.46e-119
cytoplasm	Hs	cellular component	355	1.46e-119
cytosol	Hs	cellular component	355	1.46e-119
transferase activity	Hs	molecular function	355	1.46e-119
hydrolase activity	Hs	molecular function	328	3.88e-109
Atg8 ligase activity	Hs	molecular function	355	1.46e-119
Atg12 transferase activity	Hs	molecular function	355	1.46e-119
ubiquitin-like protein transferase activity	Hs	molecular function	355	1.46e-119
enzyme binding	Hs	molecular function	355	1.46e-119
metal ion binding	Hs	molecular function	328	3.88e-109

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	2.6E-89
metabolic process	Gene3D	biological process	2.6E-89