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GENE CARD

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Gene Card

Best human hits

GLI1; GLI3; GLIS3

Species

P.mammillata

Unique Gene ID

Phmamm.g00012034

Gene Model ID

Phmamm.CG.MTP2014.S800.g12034

Location

S800:31097..33532

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S800.g12034.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

35 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
microtubule binding Blast molecular function
nuclear speck Blast cellular component
cell projection Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Orthology molecular function
organelle Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component
cell projection part Blast cellular component
microtubule Blast cellular component
cytoplasmic part Blast cellular component
nucleoplasm part Blast cellular component
enzyme binding Blast molecular function
organelle part Blast cellular component

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 41.6 8.01e-04
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 41.6 8.01e-04
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 41.6 8.01e-04
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 41.6 0.001
nucleic acid binding Hs molecular function 44.7 8.92e-05
DNA binding Hs molecular function 44.7 8.92e-05
chromatin binding Hs molecular function 41.6 8.01e-04
transcription factor activity, sequence-specific DNA binding Hs molecular function 41.6 0.001
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 41.6 8.01e-04
protein binding Hs molecular function 41.6 8.01e-04
nucleus Hs cellular component 44.7 8.92e-05
nucleoplasm Hs cellular component 41.6 8.01e-04
cytoplasm Hs cellular component 41.6 8.01e-04
cytosol Hs cellular component 41.6 8.01e-04
cilium Hs cellular component 41.6 8.01e-04
axoneme Hs cellular component 41.6 8.01e-04
beta-catenin binding Hs molecular function 41.6 0.001
microtubule binding Hs molecular function 41.6 8.01e-04
mediator complex Hs cellular component 41.6 0.001
nuclear speck Hs cellular component 41.6 0.001
transcriptional repressor complex Hs cellular component 41.6 0.001
histone acetyltransferase binding Hs molecular function 41.6 0.001
histone deacetylase binding Hs molecular function 41.6 0.001
cell projection Hs cellular component 41.6 0.001
sequence-specific DNA binding Hs molecular function 41.6 0.001
transcription regulatory region DNA binding Hs molecular function 41.6 8.01e-04
metal ion binding Hs molecular function 44.7 8.92e-05
ciliary tip Hs cellular component 41.6 8.01e-04
ciliary base Hs cellular component 41.6 8.01e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value

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