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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S5...'

Gene Card

Best human hits

ACLY; SUCLG1

Species

P.mammillata

Unique Gene ID

Phmamm.g00002716

Gene Model ID

Phmamm.CG.MTP2014.S80.g02716

Location

S80:207457..208453

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S80.g02716.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA107YA23

Plate: Plate_107_A23

AHC0AAA183YO01

Plate: Plate_183_O01

AHC0AAA189YA07

Plate: Plate_189_A07

AHC0AAA194YE13

Plate: Plate_194_E13

AHC0AAA221YB05

Plate: Plate_221_B05

WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
CoA_lig_alpha TIGRFAM Succinyl-CoA ligase, alpha subunit
CoA_lig_alpha Hamap Succinyl-CoA ligase, alpha subunit
CoA-bd SMART CoA-binding
CoA_ligase Pfam ATP-citrate lyase/succinyl-CoA ligase
Succinyl-CoA_synth-like Gene3D Succinyl-CoA synthetase-like
Cit_synth/succinyl-CoA_lig_AS ProSitePatterns ATP-citrate lyase/succinyl-CoA ligase, active site
Succinyl-CoA_synth-like SUPERFAMILY Succinyl-CoA synthetase-like
CoA-bd Pfam CoA-binding
CoA_lig_alpha PIRSF Succinyl-CoA ligase, alpha subunit
Citrt_syn/SCS-alpha_CS ProSitePatterns ATP-citrate lyase/succinyl-CoA ligase, conserved site
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily

GOSlim

30 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Orthology molecular function
catalytic activity Orthology molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular region Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
metabolic process Orthology biological process
membrane Blast cellular component
transferase activity Blast molecular function
ligase activity Orthology molecular function
metal ion binding Blast molecular function
cofactor binding Orthology molecular function
extracellular exosome Orthology cellular component
oxidation-reduction process Orthology biological process
cellular metabolic process Orthology biological process
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component
cytoplasmic vesicle Blast cellular component
lysosome Blast cellular component
vacuolar part Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
intracellular organelle part Blast cellular component

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
RNA binding Hs molecular function
catalytic activity Hs molecular function
succinate-CoA ligase (ADP-forming) activity Hs molecular function
succinate-CoA ligase (GDP-forming) activity Hs molecular function
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
mitochondrial matrix Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
tricarboxylic acid cycle Hs biological process
metabolic process Hs biological process
ligase activity Hs molecular function
cofactor binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 413 2.85e-145
RNA binding Hs molecular function 413 2.85e-145
catalytic activity Hs molecular function 413 2.85e-145
ATP citrate synthase activity Hs molecular function 89.7 1.33e-19
succinate-CoA ligase (ADP-forming) activity Hs molecular function 413 2.85e-145
succinate-CoA ligase (GDP-forming) activity Hs molecular function 413 2.85e-145
protein binding Hs molecular function 89.7 1.33e-19
ATP binding Hs molecular function 89.7 1.33e-19
extracellular region Hs cellular component 89.7 1.33e-19
nucleoplasm Hs cellular component 89.7 1.33e-19
cytoplasm Hs cellular component 89.7 1.33e-19
mitochondrion Hs cellular component 413 2.85e-145
mitochondrial inner membrane Hs cellular component 413 2.85e-145
mitochondrial matrix Hs cellular component 413 2.85e-145
cytosol Hs cellular component 413 2.85e-145
plasma membrane Hs cellular component 413 2.85e-145
citrate lyase complex Hs cellular component 89.7 1.33e-19
membrane Hs cellular component 89.7 1.33e-19
transferase activity Hs molecular function 89.7 1.33e-19
lyase activity Hs molecular function 89.7 1.33e-19
ligase activity Hs molecular function 413 2.85e-145
azurophil granule lumen Hs cellular component 89.7 1.33e-19
metal ion binding Hs molecular function 89.7 1.33e-19
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer Hs molecular function 89.7 1.33e-19
cofactor binding Hs molecular function 413 2.85e-145
extracellular exosome Hs cellular component 413 2.85e-145
ficolin-1-rich granule lumen Hs cellular component 89.7 1.33e-19

GO (InterProScan)

3 results

GO Term Analysis Type e-value
catalytic activity TIGRFAM molecular function 1.1E-132
metabolic process TIGRFAM biological process 1.1E-132
cofactor binding SMART molecular function 7.8E-32