Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA231YO02

Plate: Plate_231_O02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Chap_CCT_gamma	CDD	T-complex protein 1, gamma subunit
TCP-1-like_intermed_sf	Gene3D	TCP-1-like chaperonin intermediate domain superfamily
GROEL-like_equatorial_sf	Gene3D	GroEL-like equatorial domain superfamily
GroEL-like_apical_dom_sf	SUPERFAMILY	GroEL-like apical domain superfamily
Chaperonin_TCP-1_CS	ProSitePatterns	Chaperonin TCP-1, conserved site
Chaperone_TCP-1	PRINTS	Chaperone tailless complex polypeptide 1 (TCP-1)
Cpn60/TCP-1	Pfam	Chaperonin Cpn60/TCP-1 family
Chap_CCT_gamma	TIGRFAM	T-complex protein 1, gamma subunit
GroEL-like_apical_dom_sf	Gene3D	GroEL-like apical domain superfamily
GROEL-like_equatorial_sf	SUPERFAMILY	GroEL-like equatorial domain superfamily
TCP-1-like_intermed_sf	SUPERFAMILY	TCP-1-like chaperonin intermediate domain superfamily

GOSlim

27 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Orthology	cellular component
centrosome	Blast	cellular component
microtubule organizing center	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
microtubule	Orthology	cellular component
plasma membrane	Orthology	cellular component
protein folding	Orthology	biological process
melanosome	Blast	cellular component
cell projection	Blast	cellular component
myelin sheath	Orthology	cellular component
cell body	Orthology	cellular component
unfolded protein binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
macromolecular complex	Orthology	cellular component
sexual reproduction	Orthology	biological process
cellular process	Orthology	biological process
organelle organization	Orthology	biological process
DNA metabolic process	Orthology	biological process
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
tubulin binding	Blast	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
zona pellucida receptor complex	Hs	cellular component
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chaperonin-containing T-complex	Hs	cellular component
cytoskeleton	Hs	cellular component
microtubule	Hs	cellular component
plasma membrane	Hs	cellular component
protein folding	Hs	biological process
'de novo' protein folding	Hs	biological process
binding of sperm to zona pellucida	Hs	biological process
positive regulation of telomere maintenance via telomerase	Hs	biological process
myelin sheath	Hs	cellular component
protein binding involved in protein folding	Hs	molecular function
cell body	Hs	cellular component
pore complex assembly	Hs	biological process
protein stabilization	Hs	biological process
unfolded protein binding	Hs	molecular function
chaperone-mediated protein folding	Hs	biological process
extracellular exosome	Hs	cellular component
toxin transport	Hs	biological process
positive regulation of telomerase RNA localization to Cajal body	Hs	biological process

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	743	0.0
zona pellucida receptor complex	Hs	cellular component	743	0.0
RNA binding	Hs	molecular function	743	0.0
mRNA 3'-UTR binding	Hs	molecular function	276	1.26e-86
protein binding	Hs	molecular function	743	0.0
ATP binding	Hs	molecular function	743	0.0
nucleoplasm	Hs	cellular component	260	1.13e-80
nucleolus	Hs	cellular component	276	1.26e-86
cytoplasm	Hs	cellular component	743	0.0
centrosome	Hs	cellular component	276	1.26e-86
microtubule organizing center	Hs	cellular component	276	1.26e-86
cytosol	Hs	cellular component	743	0.0
chaperonin-containing T-complex	Hs	cellular component	743	0.0
cytoskeleton	Hs	cellular component	743	0.0
microtubule	Hs	cellular component	743	0.0
plasma membrane	Hs	cellular component	743	0.0
G-protein beta-subunit binding	Hs	molecular function	276	1.26e-86
melanosome	Hs	cellular component	260	1.13e-80
cell projection	Hs	cellular component	260	1.13e-80
myelin sheath	Hs	cellular component	743	0.0
protein binding involved in protein folding	Hs	molecular function	743	0.0
cell body	Hs	cellular component	743	0.0
mRNA 5'-UTR binding	Hs	molecular function	276	1.26e-86
beta-tubulin binding	Hs	molecular function	276	1.26e-86
unfolded protein binding	Hs	molecular function	743	0.0
extracellular exosome	Hs	cellular component	743	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type
ATP binding	CDD	molecular function
protein folding	CDD	biological process
unfolded protein binding	CDD	molecular function

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences