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GENE CARD

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Gene Card

Best human hits

RNF17; TDRD5; TDRD7

Species

P.mammillata

Unique Gene ID

Phmamm.g00002599

Gene Model ID

Phmamm.CG.MTP2014.S75.g02599

Location

S75:127741..132379

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S75.g02599.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
OST-HTH/LOTUS_dom ProSiteProfiles OST-HTH/LOTUS domain
SNase_OB-fold_sf Gene3D SNase-like, OB-fold superfamily
Tudor ProSiteProfiles Tudor domain
OST-HTH/LOTUS_dom Pfam OST-HTH/LOTUS domain
Tudor Pfam Tudor domain
Tudor SMART Tudor domain

GOSlim

16 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Blast cellular component
cytoplasm Orthology cellular component
mitochondrial matrix Orthology cellular component
spermatogenesis Orthology biological process
cell differentiation Orthology biological process
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
protein N-terminus binding Orthology molecular function
anatomical structure morphogenesis Orthology biological process
animal organ development Orthology biological process
regulation of gene expression Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
lens morphogenesis in camera-type eye Hs biological process
RNA binding Hs molecular function
mRNA binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrial matrix Hs cellular component
spermatogenesis Hs biological process
posttranscriptional regulation of gene expression Hs biological process
cell differentiation Hs biological process
chromatoid body Hs cellular component
ribonucleoprotein granule Hs cellular component
protein N-terminus binding Hs molecular function
lens fiber cell differentiation Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 105 6.69e-23
mRNA binding Hs molecular function 105 6.69e-23
protein binding Hs molecular function 105 6.69e-23
nucleus Hs cellular component 51.6 3.27e-06
cytoplasm Hs cellular component 105 6.69e-23
mitochondrial matrix Hs cellular component 105 6.69e-23
chromatoid body Hs cellular component 105 6.69e-23
ribonucleoprotein granule Hs cellular component 105 6.69e-23
protein homodimerization activity Hs molecular function 51.6 3.27e-06
metal ion binding Hs molecular function 51.6 3.27e-06
protein N-terminus binding Hs molecular function 105 6.69e-23
pi-body Hs cellular component 67.4 4.34e-11

GO (InterProScan)

No result

GO Term Analysis Type e-value