Gene Card
Best human hits
RPL27A
Species
Unique Gene ID
Phmamm.g00011601
Gene Model ID
Phmamm.CG.MTP2014.S737.g11601
Location
S737:18068..19590
Transcript Models and Sequences
Phmamm.CG.MTP2014.S737.g11601.01.t
Phmamm.CG.MTP2014.S737.g11601.02.t
Genoscope Yasuo Villefranche
1 result
AHC0AAA254YP18
Plate: Plate_254_P18
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| L18e/L15P_sf | SUPERFAMILY | Ribosomal L18e/L15P superfamily |
| Ribosomal_L18e/L15P | Pfam | Ribosomal protein L18e/L15P |
| Ribosomal_L15_CS | ProSitePatterns | Ribosomal protein L15, conserved site |
| Ribosomal_L15 | Hamap | Ribosomal protein L15 |
GOSlim
13 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
GO (Orthology)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| cytoplasmic translation | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| large ribosomal subunit | Hs | cellular component |
| membrane | Hs | cellular component |
| cytosolic large ribosomal subunit | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 244 | 1.31e-84 |
| structural constituent of ribosome | Hs | molecular function | 244 | 1.31e-84 |
| protein binding | Hs | molecular function | 244 | 1.31e-84 |
| intracellular | Hs | cellular component | 244 | 1.31e-84 |
| endoplasmic reticulum | Hs | cellular component | 244 | 1.31e-84 |
| cytosol | Hs | cellular component | 244 | 1.31e-84 |
| ribosome | Hs | cellular component | 244 | 1.31e-84 |
| large ribosomal subunit | Hs | cellular component | 244 | 1.31e-84 |
| membrane | Hs | cellular component | 244 | 1.31e-84 |
| cytosolic large ribosomal subunit | Hs | cellular component | 244 | 1.31e-84 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 244 | 1.31e-84 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | Hamap | molecular function | 11.585 |
| intracellular | ProSitePatterns | cellular component | |
| ribosome | ProSitePatterns | cellular component | |
| translation | Hamap | biological process | 11.585 |
| large ribosomal subunit | Hamap | cellular component | 11.585 |
