Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NR5A1; NR5A2; NR6A1

Species

P.mammillata

Unique Gene ID

Phmamm.g00011487

Gene Model ID

Phmamm.CG.MTP2014.S721.g11487

Location

S721:55533..68863

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA24YI01

Plate: Plate_24_I01

AHC0AAA43YF23

Plate: Plate_43_F23

AHC0AAA54YN09

Plate: Plate_54_N09

AHC0AAA64YI02

Plate: Plate_64_I02

AHC0AAA116YM08

Plate: Plate_116_M08

AHC0AAA133YK12

Plate: Plate_133_K12

AHC0AAA137YM02

Plate: Plate_137_M02

AHC0AAA133YK10

Plate: Plate_133_K10

AHC0AAA186YE02

Plate: Plate_186_E02

AHC0AAA189YK14

Plate: Plate_189_K14

AHC0AAA257YB12

Plate: Plate_257_B12

AHC0AAA258YL02

Plate: Plate_258_L02

AHC0AAA261YB12

Plate: Plate_261_B12

AHC0AAA54YP11

Plate: Plate_54_P11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type
Nucl_hrmn_rcpt_lig-bd SMART Nuclear hormone receptor, ligand-binding domain
NHR_like_dom_sf SUPERFAMILY Nuclear hormone receptor-like domain superfamily
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Nuclear_hrmn_rcpt PRINTS Nuclear hormone receptor
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Nucl_hrmn_rcpt_lig-bd ProSiteProfiles Nuclear hormone receptor, ligand-binding domain
Nucl_hrmn_rcpt_lig-bd Pfam Nuclear hormone receptor, ligand-binding domain
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type

GOSlim

37 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Blast molecular function
double-stranded DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
gamete generation Orthology biological process
spermatogenesis Orthology biological process
zinc ion binding Orthology molecular function
cell proliferation Orthology biological process
enzyme binding Blast molecular function
protein homodimerization activity Orthology molecular function
sequence-specific DNA binding Orthology molecular function
transcription regulatory region DNA binding Blast molecular function
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
signal transduction Orthology biological process
response to lipid Orthology biological process
signaling receptor activity Orthology molecular function
cellular response to organic substance Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
anion binding Blast molecular function
binding Blast molecular function
nuclear part Blast cellular component

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
steroid hormone receptor activity Hs molecular function
nuclear receptor activity Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
gamete generation Hs biological process
spermatogenesis Hs biological process
zinc ion binding Hs molecular function
cell proliferation Hs biological process
intracellular steroid hormone receptor signaling pathway Hs biological process
protein homodimerization activity Hs molecular function
steroid hormone mediated signaling pathway Hs biological process
sequence-specific DNA binding Hs molecular function
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription regulatory region sequence-specific DNA binding Hs molecular function 140 2.71e-35
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 132 5.81e-33
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 454 2.81e-153
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 140 2.71e-35
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 454 2.81e-153
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 454 2.81e-153
DNA binding Hs molecular function 454 2.81e-153
chromatin binding Hs molecular function 140 2.71e-35
double-stranded DNA binding Hs molecular function 140 2.71e-35
transcription factor activity, sequence-specific DNA binding Hs molecular function 454 2.81e-153
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 140 2.71e-35
steroid hormone receptor activity Hs molecular function 454 2.81e-153
transcription coactivator activity Hs molecular function 132 5.81e-33
nuclear receptor activity Hs molecular function 454 2.81e-153
protein binding Hs molecular function 140 2.71e-35
phospholipid binding Hs molecular function 140 2.71e-35
nucleus Hs cellular component 454 2.81e-153
nucleoplasm Hs cellular component 454 2.81e-153
transcription factor complex Hs cellular component 454 2.81e-153
cytoplasm Hs cellular component 140 2.71e-35
zinc ion binding Hs molecular function 454 2.81e-153
lipid binding Hs molecular function 140 2.71e-35
enzyme binding Hs molecular function 132 5.81e-33
protein homodimerization activity Hs molecular function 454 2.81e-153
sequence-specific DNA binding Hs molecular function 454 2.81e-153
transcription regulatory region DNA binding Hs molecular function 140 2.71e-35
metal ion binding Hs molecular function 454 2.81e-153
RNA polymerase II transcription factor complex Hs cellular component 140 2.71e-35

GO (InterProScan)

8 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 1.7E-15
transcription factor activity, sequence-specific DNA binding SMART molecular function 1.9E-34
steroid hormone receptor activity PRINTS molecular function 1.7E-15
nucleus SMART cellular component 1.9E-34
regulation of transcription, DNA-templated SMART biological process 1.9E-34
zinc ion binding SMART molecular function 1.9E-34
steroid hormone mediated signaling pathway SMART biological process 6.5E-20
sequence-specific DNA binding SMART molecular function 1.9E-34