- Gene 'Phmamm.CG.MTP2014.S6...'
Gene Card
Best human hits
NLE1; PEX7; WDR12
Species
Unique Gene ID
Phmamm.g00011235
Gene Model ID
Phmamm.CG.MTP2014.S688.g11235
Location
S688:26046..30139
Transcript Models and Sequences
Genoscope Yasuo Villefranche
2 results
AHC0AAA206YB10
Plate: Plate_206_B10
AHC0AAA229YB10
Plate: Plate_229_B10
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| G-protein_beta_WD-40_rep | PRINTS | G-protein beta WD-40 repeat |
| WDR12/Ytm1 | Hamap | WD repeat WDR12/Ytm1 |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | Pfam | WD40 repeat |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| WD40_repeat | SMART | WD40 repeat |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| NLE | Pfam | NLE |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Blast | cellular component |
| peroxisome | Blast | cellular component |
| cytosol | Blast | cellular component |
| ribosome | Blast | cellular component |
| Notch signaling pathway | Orthology | biological process |
| cell proliferation | Orthology | biological process |
| enzyme binding | Blast | molecular function |
| protein homodimerization activity | Blast | molecular function |
| RNA processing | Orthology | biological process |
| macromolecular complex | Orthology | cellular component |
| macromolecular complex binding | Orthology | molecular function |
| binding | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| intracellular organelle lumen | Blast | cellular component |
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| Notch signaling pathway | Hs | biological process |
| cell proliferation | Hs | biological process |
| preribosome, large subunit precursor | Hs | cellular component |
| ribosome biogenesis | Hs | biological process |
| ribosomal large subunit biogenesis | Hs | biological process |
| ribonucleoprotein complex binding | Hs | molecular function |
| PeBoW complex | Hs | cellular component |
GO (Blast)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| peroxisome matrix targeting signal-2 binding | Hs | molecular function | 87.0 | 4.44e-19 |
| protein binding | Hs | molecular function | 317 | 2.84e-105 |
| nucleus | Hs | cellular component | 317 | 2.84e-105 |
| nucleoplasm | Hs | cellular component | 317 | 2.84e-105 |
| nucleolus | Hs | cellular component | 317 | 2.84e-105 |
| cytoplasm | Hs | cellular component | 87.0 | 4.44e-19 |
| peroxisome | Hs | cellular component | 87.0 | 4.44e-19 |
| peroxisomal matrix | Hs | cellular component | 87.0 | 4.44e-19 |
| cytosol | Hs | cellular component | 87.0 | 4.44e-19 |
| ribosome | Hs | cellular component | 86.7 | 1.92e-18 |
| enzyme binding | Hs | molecular function | 87.0 | 4.44e-19 |
| preribosome, large subunit precursor | Hs | cellular component | 317 | 2.84e-105 |
| protein homodimerization activity | Hs | molecular function | 87.0 | 4.44e-19 |
| ribonucleoprotein complex binding | Hs | molecular function | 317 | 2.84e-105 |
| PeBoW complex | Hs | cellular component | 317 | 2.84e-105 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 4.58E-55 |
| ribosome biogenesis | Hamap | biological process | 25.636 |
