- Gene 'Phmamm.CG.MTP2014.S6...'
Gene Card
Best human hits
TGFBRAP1; VPS39
Species
Unique Gene ID
Phmamm.g00011004
Gene Model ID
Phmamm.CG.MTP2014.S660.g11004
Location
S660:17491..20218
Transcript Models and Sequences
Genoscope Yasuo Villefranche
2 results
AHC0AAA15YG06
Plate: Plate_15_G06
AHC0AAA79YE18
Plate: Plate_79_E18
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Clathrin_H-chain/VPS_repeat | ProSiteProfiles | Clathrin, heavy chain/VPS, 7-fold repeat |
| CNH_dom | Pfam | Citron homology (CNH) domain |
| CNH_dom | ProSiteProfiles | Citron homology (CNH) domain |
| Vam6/VPS39/TRAP1 | PANTHER | Vam6/VPS39/TRAP1 family |
| VPS39/TGF_beta_rcpt-assoc_2 | Pfam | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 |
GOSlim
25 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Orthology | molecular function |
| intracellular | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| lysosome | Blast | cellular component |
| lysosomal membrane | Blast | cellular component |
| endosome | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| regulation of transcription, DNA-templated | Orthology | biological process |
| intracellular protein transport | Orthology | biological process |
| signal transduction | Orthology | biological process |
| protein transport | Orthology | biological process |
| membrane | Orthology | cellular component |
| intracellular membrane-bounded organelle | Orthology | cellular component |
| receptor binding | Orthology | molecular function |
| cell surface receptor signaling pathway | Orthology | biological process |
| cellular response to organic substance | Orthology | biological process |
| intracellular transport | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| membrane organization | Orthology | biological process |
| organelle organization | Orthology | biological process |
| cytoplasmic part | Blast | cellular component |
| membrane part | Blast | cellular component |
| whole membrane | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
GO (Orthology)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| transforming growth factor beta receptor binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| endosome | Hs | cellular component |
| early endosome | Hs | cellular component |
| regulation of transcription, DNA-templated | Hs | biological process |
| intracellular protein transport | Hs | biological process |
| signal transduction | Hs | biological process |
| transforming growth factor beta receptor signaling pathway | Hs | biological process |
| endosome to lysosome transport | Hs | biological process |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| vesicle-mediated transport | Hs | biological process |
| CORVET complex | Hs | cellular component |
| endosomal vesicle fusion | Hs | biological process |
| intracellular membrane-bounded organelle | Hs | cellular component |
| SMAD binding | Hs | molecular function |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transforming growth factor beta receptor binding | Hs | molecular function | 590 | 0.0 |
| protein binding | Hs | molecular function | 590 | 0.0 |
| intracellular | Hs | cellular component | 157 | 2.77e-39 |
| cytoplasm | Hs | cellular component | 590 | 0.0 |
| lysosome | Hs | cellular component | 157 | 2.77e-39 |
| lysosomal membrane | Hs | cellular component | 157 | 2.77e-39 |
| endosome | Hs | cellular component | 590 | 0.0 |
| early endosome | Hs | cellular component | 590 | 0.0 |
| late endosome | Hs | cellular component | 157 | 2.77e-39 |
| membrane | Hs | cellular component | 590 | 0.0 |
| AP-3 adaptor complex | Hs | cellular component | 157 | 2.77e-39 |
| HOPS complex | Hs | cellular component | 157 | 2.77e-39 |
| late endosome membrane | Hs | cellular component | 157 | 2.77e-39 |
| CORVET complex | Hs | cellular component | 590 | 0.0 |
| intracellular membrane-bounded organelle | Hs | cellular component | 590 | 0.0 |
| SMAD binding | Hs | molecular function | 590 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| intracellular protein transport | ProSiteProfiles | biological process | 22.362 |
| vesicle-mediated transport | PANTHER | biological process | 4.1E-157 |
