IPR Term	Analysis	Definition
USP4	PANTHER	Ubiquitin carboxyl-terminal hydrolase USP4
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
Peptidase_C19_UCH	Pfam	Peptidase C19, ubiquitin carboxyl-terminal hydrolase
USP_CS	ProSitePatterns	Ubiquitin specific protease, conserved site
USP_dom	ProSiteProfiles	Ubiquitin specific protease domain

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
lysosome	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
proteolysis	Orthology	biological process
peptidase activity	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Blast	molecular function
metal ion binding	Blast	molecular function
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
endopeptidase activity	Blast	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component
receptor binding	Blast	molecular function

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin-dependent protein catabolic process	Hs	biological process
protein deubiquitination	Hs	biological process
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cysteine-type endopeptidase activity	Hs	molecular function	114	8.90e-26
thiol-dependent ubiquitin-specific protease activity	Hs	molecular function	114	8.90e-26
protein binding	Hs	molecular function	114	8.90e-26
nucleus	Hs	cellular component	114	8.90e-26
nucleoplasm	Hs	cellular component	114	8.90e-26
chromosome	Hs	cellular component	114	8.90e-26
cytoplasm	Hs	cellular component	114	8.90e-26
lysosome	Hs	cellular component	114	1.53e-25
endoplasmic reticulum	Hs	cellular component	99.0	7.58e-21
endoplasmic reticulum membrane	Hs	cellular component	99.0	7.58e-21
cytosol	Hs	cellular component	114	8.90e-26
plasma membrane	Hs	cellular component	114	1.53e-25
peptidase activity	Hs	molecular function	114	8.90e-26
cysteine-type peptidase activity	Hs	molecular function	114	8.90e-26
membrane	Hs	cellular component	99.0	7.58e-21
integral component of membrane	Hs	cellular component	99.0	7.58e-21
hydrolase activity	Hs	molecular function	114	8.90e-26
ubiquitin protein ligase binding	Hs	molecular function	99.0	7.58e-21
adenosine receptor binding	Hs	molecular function	114	1.53e-25
thiol-dependent ubiquitinyl hydrolase activity	Hs	molecular function	114	8.90e-26
identical protein binding	Hs	molecular function	114	1.53e-25
metal ion binding	Hs	molecular function	114	1.53e-25
Hsp90 protein binding	Hs	molecular function	99.0	7.58e-21
Lys48-specific deubiquitinase activity	Hs	molecular function	99.0	7.58e-21

GO Term	Analysis	Type	e-value
ubiquitin-dependent protein catabolic process	ProSitePatterns	biological process
protein deubiquitination	PANTHER	biological process	5.2E-101
thiol-dependent ubiquitinyl hydrolase activity	Pfam	molecular function	3.6E-27