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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

CDC23; CDC27; TTC6

Species

P.mammillata

Unique Gene ID

Phmamm.g00002284

Gene Model ID

Phmamm.CG.MTP2014.S64.g02284

Location

S64:96995..109516

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S64.g02284.01.t
Phmamm.CG.MTP2014.S64.g02284.02.t
Phmamm.CG.MTP2014.S64.g02284.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA1YO23

Plate: Plate_1_O23

AHC0AAA12YL14

Plate: Plate_12_L14

AHC0AAA21YG01

Plate: Plate_21_G01

AHC0AAA9YK06

Plate: Plate_9_K06

AHC0AAA34YB11

Plate: Plate_34_B11

AHC0AAA66YO06

Plate: Plate_66_O06

AHC0AAA68YL08

Plate: Plate_68_L08

AHC0AAA107YD23

Plate: Plate_107_D23

AHC0AAA109YK02

Plate: Plate_109_K02

AHC0AAA116YH11

Plate: Plate_116_H11

AHC0AAA123YC17

Plate: Plate_123_C17

AHC0AAA123YL03

Plate: Plate_123_L03

AHC0AAA137YD21

Plate: Plate_137_D21

AHC0AAA189YG19

Plate: Plate_189_G19

AHC0AAA200YL06

Plate: Plate_200_L06

AHC0AAA219YI19

Plate: Plate_219_I19

AHC0AAA221YO13

Plate: Plate_221_O13

AHC0AAA261YG10

Plate: Plate_261_G10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TPR_repeat ProSiteProfiles Tetratricopeptide repeat
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR_repeat SMART Tetratricopeptide repeat
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain

GOSlim

22 results

GO Term Annotation Origin Type
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
cytosol Orthology cellular component
cell proliferation Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
protein ubiquitination Orthology biological process
cell division Orthology biological process
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
cytoskeletal part Orthology cellular component
microtubule cytoskeleton Orthology cellular component
microtubule Orthology cellular component
mitotic cell cycle phase transition Orthology biological process
enzyme binding Orthology molecular function
proteolysis Orthology biological process
protein polyubiquitination Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
anaphase-promoting complex Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
spindle Hs cellular component
cytosol Hs cellular component
spindle microtubule Hs cellular component
metaphase/anaphase transition of mitotic cell cycle Hs biological process
cell proliferation Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
protein ubiquitination Hs biological process
protein phosphatase binding Hs molecular function
anaphase-promoting complex-dependent catabolic process Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
cell division Hs biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle Hs biological process
protein K11-linked ubiquitination Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 110 5.36e-25
protein binding Hs molecular function 509 9.79e-170
intracellular Hs cellular component 110 5.36e-25
nucleus Hs cellular component 509 9.79e-170
nucleoplasm Hs cellular component 509 9.79e-170
anaphase-promoting complex Hs cellular component 509 9.79e-170
cytoplasm Hs cellular component 509 9.79e-170
centrosome Hs cellular component 509 9.79e-170
spindle Hs cellular component 509 9.79e-170
cytosol Hs cellular component 509 9.79e-170
spindle microtubule Hs cellular component 509 9.79e-170
membrane Hs cellular component 509 9.79e-170
integral component of membrane Hs cellular component 509 9.79e-170
protein phosphatase binding Hs molecular function 509 9.79e-170

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 9.1E-49

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