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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

SETD3; SETD4

Species

P.mammillata

Unique Gene ID

Phmamm.g00010668

Gene Model ID

Phmamm.CG.MTP2014.S624.g10668

Location

S624:542..6729

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S624.g10668.01.t
Phmamm.CG.MTP2014.S624.g10668.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA58YO09

Plate: Plate_58_O09

AHC0AAA162YJ22

Plate: Plate_162_J22

AHC0AAA200YG02

Plate: Plate_200_G02

AHC0AAA204YM03

Plate: Plate_204_M03

AHC0AAA214YL06

Plate: Plate_214_L06

AHC0AAA220YB13

Plate: Plate_220_B13

AHC0AAA268YH17

Plate: Plate_268_H17

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Hist-Lys_N-MeTrfase_SETD3 ProSiteProfiles Histone-lysine N-methyltransferase, SETD3
Rubisco_LSMT_subst-bd_sf Gene3D Rubisco LSMT, substrate-binding domain superfamily
Rubisco_LSMT_subst-bd_sf SUPERFAMILY Rubisco LSMT, substrate-binding domain superfamily
SET_dom ProSiteProfiles SET domain
Rubisco_LSMT_subst-bd Pfam Rubisco LSMT, substrate-binding domain
SET_dom Pfam SET domain

GOSlim

17 results

GO Term Annotation Origin Type
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transferase activity Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
regulation of nucleic acid-templated transcription Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
transcription factor binding Orthology molecular function
organelle organization Orthology biological process
metabolic process Orthology biological process
cellular protein modification process Orthology biological process

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nuclear chromatin Hs cellular component
RNA polymerase II activating transcription factor binding Hs molecular function
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
methyltransferase activity Hs molecular function
histone H3-K36 methylation Hs biological process
transferase activity Hs molecular function
peptidyl-lysine methylation Hs biological process
peptidyl-lysine trimethylation Hs biological process
histone-lysine N-methyltransferase activity Hs molecular function
peptidyl-lysine monomethylation Hs biological process
peptidyl-lysine dimethylation Hs biological process
methylation Hs biological process
histone methyltransferase activity (H3-K4 specific) Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
histone methyltransferase activity (H3-K36 specific) Hs molecular function
histone H3-K4 methylation Hs biological process
regulation of nucleic acid-templated transcription Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 323 8.68e-103
RNA polymerase II activating transcription factor binding Hs molecular function 323 8.68e-103
transcription coactivator activity Hs molecular function 323 8.68e-103
protein binding Hs molecular function 323 8.68e-103
nucleus Hs cellular component 323 8.68e-103
nucleoplasm Hs cellular component 323 8.68e-103
nucleolus Hs cellular component 75.9 1.42e-14
methyltransferase activity Hs molecular function 323 8.68e-103
protein-lysine N-methyltransferase activity Hs molecular function 75.9 1.42e-14
transferase activity Hs molecular function 323 8.68e-103
histone-lysine N-methyltransferase activity Hs molecular function 323 8.68e-103
histone methyltransferase activity (H3-K4 specific) Hs molecular function 323 8.68e-103
histone methyltransferase activity (H3-K36 specific) Hs molecular function 323 8.68e-103

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription coactivator activity ProSiteProfiles molecular function 91.719
protein binding Pfam molecular function 4.6E-14
histone H3-K36 methylation ProSiteProfiles biological process 91.719
peptidyl-lysine methylation ProSiteProfiles biological process 91.719
histone methyltransferase activity (H3-K36 specific) ProSiteProfiles molecular function 91.719

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