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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

COL21A1; COL6A5

Species

P.mammillata

Unique Gene ID

Phmamm.g00018978

Gene Model ID

Phmamm.CG.MTP2014.S6188.g18978

Location

S6188:245..2501

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S6188.g18978.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A ProSiteProfiles von Willebrand factor, type A
VWF_A Pfam von Willebrand factor, type A

GOSlim

7 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Blast cellular component
cytosol Blast cellular component
macromolecular complex Blast cellular component
extracellular region part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 40.8 2.60e-04
extracellular region Hs cellular component 43.9 2.76e-05
proteinaceous extracellular matrix Hs cellular component 43.9 2.76e-05
collagen trimer Hs cellular component 43.9 2.76e-05
cytoplasm Hs cellular component 43.9 2.76e-05
endoplasmic reticulum lumen Hs cellular component 43.9 2.76e-05
cytosol Hs cellular component 43.9 2.76e-05
extracellular matrix Hs cellular component 43.9 2.76e-05

GO (InterProScan)

No result

GO Term Analysis Type e-value