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GENE CARD

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Gene Card

Best human hits

BCL2L2-PABPN1; PABPN1; PABPN1L

Species

P.mammillata

Unique Gene ID

Phmamm.g00010586

Gene Model ID

Phmamm.CG.MTP2014.S615.g10586

Location

S615:56691..63013

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

54 results

AHC0AAA10YP17

Plate: Plate_10_P17

AHC0AAA17YF17

Plate: Plate_17_F17

AHC0AAA18YA02

Plate: Plate_18_A02

AHC0AAA18YN16

Plate: Plate_18_N16

AHC0AAA24YB12

Plate: Plate_24_B12

AHC0AAA3YC02

Plate: Plate_3_C02

AHC0AAA4YE10

Plate: Plate_4_E10

AHC0AAA34YN15

Plate: Plate_34_N15

AHC0AAA41YB13

Plate: Plate_41_B13

AHC0AAA41YP18

Plate: Plate_41_P18

AHC0AAA60YI01

Plate: Plate_60_I01

AHC0AAA60YP23

Plate: Plate_60_P23

AHC0AAA63YE01

Plate: Plate_63_E01

AHC0AAA64YB09

Plate: Plate_64_B09

AHC0AAA65YK19

Plate: Plate_65_K19

AHC0AAA67YM12

Plate: Plate_67_M12

AHC0AAA77YF15

Plate: Plate_77_F15

AHC0AAA80YE18

Plate: Plate_80_E18

AHC0AAA100YF03

Plate: Plate_100_F03

AHC0AAA104YC16

Plate: Plate_104_C16

AHC0AAA123YK20

Plate: Plate_123_K20

AHC0AAA124YI03

Plate: Plate_124_I03

AHC0AAA132YA04

Plate: Plate_132_A04

AHC0AAA132YC05

Plate: Plate_132_C05

AHC0AAA137YD09

Plate: Plate_137_D09

AHC0AAA150YD19

Plate: Plate_150_D19

AHC0AAA154YD18

Plate: Plate_154_D18

AHC0AAA155YL22

Plate: Plate_155_L22

AHC0AAA156YO06

Plate: Plate_156_O06

AHC0AAA84YK06

Plate: Plate_84_K06

AHC0AAA89YC08

Plate: Plate_89_C08

AHC0AAA90YD19

Plate: Plate_90_D19

AHC0AAA91YN24

Plate: Plate_91_N24

AHC0AAA95YL11

Plate: Plate_95_L11

AHC0AAA96YK10

Plate: Plate_96_K10

AHC0AAA98YN08

Plate: Plate_98_N08

AHC0AAA161YD15

Plate: Plate_161_D15

AHC0AAA167YN05

Plate: Plate_167_N05

AHC0AAA174YP03

Plate: Plate_174_P03

AHC0AAA177YJ16

Plate: Plate_177_J16

AHC0AAA180YC04

Plate: Plate_180_C04

AHC0AAA184YF08

Plate: Plate_184_F08

AHC0AAA191YJ24

Plate: Plate_191_J24

AHC0AAA192YH23

Plate: Plate_192_H23

AHC0AAA211YF02

Plate: Plate_211_F02

AHC0AAA221YF17

Plate: Plate_221_F17

AHC0AAA222YL19

Plate: Plate_222_L19

AHC0AAA234YF06

Plate: Plate_234_F06

AHC0AAA241YN18

Plate: Plate_241_N18

AHC0AAA244YP12

Plate: Plate_244_P12

AHC0AAA246YH11

Plate: Plate_246_H11

AHC0AAA262YL24

Plate: Plate_262_L24

AHC0AAA263YJ03

Plate: Plate_263_J03

AHC0AAA98YN06

Plate: Plate_98_N06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
PABP2 PANTHER Polyadenylate-binding protein 2
RRM_dom ProSiteProfiles RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
RRM_dom Pfam RNA recognition motif domain

GOSlim

31 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
apoptotic process Orthology biological process
spermatogenesis Orthology biological process
membrane Orthology cellular component
nuclear speck Blast cellular component
mitochondrial membrane Orthology cellular component
identical protein binding Orthology molecular function
protein homodimerization activity Orthology molecular function
regulation of apoptotic process Orthology biological process
negative regulation of apoptotic process Orthology biological process
protein heterodimerization activity Orthology molecular function
extracellular exosome Orthology cellular component
cytosol Orthology cellular component
integral component of membrane Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular signal transduction Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
macromolecular complex Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
negative regulation of signal transduction Orthology biological process
nuclear part Blast cellular component
enzyme binding Blast molecular function
transferase activity, transferring phosphorus-containing groups InterProScan molecular function
positive regulation of catalytic activity InterProScan biological process

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
apoptotic process Hs biological process
spermatogenesis Hs biological process
intrinsic apoptotic signaling pathway in response to DNA damage Hs biological process
membrane Hs cellular component
mitochondrial membrane Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
regulation of apoptotic process Hs biological process
negative regulation of apoptotic process Hs biological process
protein heterodimerization activity Hs molecular function
extracellular exosome Hs cellular component
Bcl-2 family protein complex Hs cellular component
extrinsic apoptotic signaling pathway in absence of ligand Hs biological process
disordered domain specific binding Hs molecular function
negative regulation of intrinsic apoptotic signaling pathway Hs biological process
cytosol Hs cellular component
integral component of membrane Hs cellular component
BH domain binding Hs molecular function

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 177 1.16e-54
RNA binding Hs molecular function 177 1.16e-54
protein binding Hs molecular function 177 1.16e-54
nucleus Hs cellular component 177 1.16e-54
nucleoplasm Hs cellular component 177 1.16e-54
cytoplasm Hs cellular component 177 1.16e-54
mitochondrion Hs cellular component 174 4.21e-53
mitochondrial outer membrane Hs cellular component 174 4.21e-53
membrane Hs cellular component 174 4.21e-53
nuclear speck Hs cellular component 177 1.16e-54
intracellular ribonucleoprotein complex Hs cellular component 177 1.16e-54
mitochondrial membrane Hs cellular component 174 4.21e-53
nuclear inclusion body Hs cellular component 177 1.16e-54
identical protein binding Hs molecular function 174 4.21e-53
protein homodimerization activity Hs molecular function 174 4.21e-53
protein heterodimerization activity Hs molecular function 174 4.21e-53
extracellular exosome Hs cellular component 174 4.21e-53
RNA polymerase binding Hs molecular function 177 1.16e-54
Bcl-2 family protein complex Hs cellular component 174 4.21e-53
disordered domain specific binding Hs molecular function 174 4.21e-53

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 2.55E-28
RNA binding PANTHER molecular function 7.4E-94
positive regulation of polynucleotide adenylyltransferase activity PANTHER biological process 7.4E-94