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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

CYP26A1; CYP26B1; CYP26C1

Species

P.mammillata

Unique Gene ID

Phmamm.g00010551

Gene Model ID

Phmamm.CG.MTP2014.S612.g10551

Location

S612:62138..65189

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S612.g10551.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA40YK17

Plate: Plate_40_K17

AHC0AAA212YN17

Plate: Plate_212_N17

AHC0AAA219YP14

Plate: Plate_219_P14

AHC0AAA248YK14

Plate: Plate_248_K14

AHC0AAA261YH19

Plate: Plate_261_H19

AHC0AAA265YL20

Plate: Plate_265_L20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Cyt_P450_sf Gene3D Cytochrome P450 superfamily
Cyt_P450_E_grp-IV PRINTS Cytochrome P450, E-class, group IV
Cyt_P450 PRINTS Cytochrome P450
Cyt_P450 Pfam Cytochrome P450
Cyt_P450_CS ProSitePatterns Cytochrome P450, conserved site
Cyt_P450_sf SUPERFAMILY Cytochrome P450 superfamily

GOSlim

14 results

GO Term Annotation Origin Type
iron ion binding Blast molecular function
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
heme binding Blast molecular function
organelle membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
small molecule binding Blast molecular function
anion binding Blast molecular function
catalytic activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
retinoic acid binding Hs molecular function 159 1.54e-43
monooxygenase activity Hs molecular function 159 1.54e-43
iron ion binding Hs molecular function 159 1.54e-43
cytoplasm Hs cellular component 142 1.44e-37
endoplasmic reticulum Hs cellular component 159 1.54e-43
endoplasmic reticulum membrane Hs cellular component 159 1.54e-43
retinoic acid 4-hydroxylase activity Hs molecular function 159 1.54e-43
membrane Hs cellular component 159 1.54e-43
integral component of membrane Hs cellular component 135 6.27e-35
oxidoreductase activity Hs molecular function 159 1.54e-43
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 159 1.54e-43
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Hs molecular function 159 1.54e-43
oxygen binding Hs molecular function 159 1.54e-43
heme binding Hs molecular function 159 1.54e-43
organelle membrane Hs cellular component 159 1.54e-43
intracellular membrane-bounded organelle Hs cellular component 159 1.54e-43
metal ion binding Hs molecular function 159 1.54e-43

GO (InterProScan)

5 results

GO Term Analysis Type e-value
monooxygenase activity PRINTS molecular function 3.8E-9
iron ion binding Gene3D molecular function 7.6E-58
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Gene3D molecular function 7.6E-58
heme binding Gene3D molecular function 7.6E-58
oxidation-reduction process Gene3D biological process 7.6E-58