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GENE CARD

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Gene Card

Best human hits

NPLOC4

Species

P.mammillata

Unique Gene ID

Phmamm.g00002203

Gene Model ID

Phmamm.CG.MTP2014.S61.g02203

Location

S61:123604..127828

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

13 results

AHC0AAA2YM02

Plate: Plate_2_M02

AHC0AAA61YN12

Plate: Plate_61_N12

AHC0AAA69YM14

Plate: Plate_69_M14

AHC0AAA141YK03

Plate: Plate_141_K03

AHC0AAA162YC10

Plate: Plate_162_C10

AHC0AAA174YN01

Plate: Plate_174_N01

AHC0AAA175YE12

Plate: Plate_175_E12

AHC0AAA184YG16

Plate: Plate_184_G16

AHC0AAA185YE02

Plate: Plate_185_E02

AHC0AAA228YH19

Plate: Plate_228_H19

AHC0AAA243YO23

Plate: Plate_243_O23

AHC0AAA259YL15

Plate: Plate_259_L15

AHC0AAA262YP17

Plate: Plate_262_P17

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
NPL4_C Pfam Nuclear pore localisation protein NPL4, C-terminal
Npl4 PIRSF Nuclear protein localization protein 4
MPN ProSiteProfiles MPN domain
NPL4_C CDD Nuclear pore localisation protein NPL4, C-terminal
NPL4_Zn-bd_put Pfam NPL4, zinc-binding putative
Npl4_Ub-like_dom Pfam Nuclear pore localisation protein Npl4, ubiquitin-like domain

GOSlim

17 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytosol Orthology cellular component
ubiquitin protein ligase binding Orthology molecular function
nuclear outer membrane-endoplasmic reticulum membrane network Orthology cellular component
metal ion binding Orthology molecular function
proteolysis Orthology biological process
organelle organization Orthology biological process
cellular response to stress Orthology biological process
response to organic substance Orthology biological process
intracellular protein transport Orthology biological process
endoplasmic reticulum membrane Orthology cellular component
macromolecular complex Orthology cellular component
cytoplasmic part Orthology cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ubiquitin-dependent protein catabolic process Hs biological process
Golgi organization Hs biological process
ubiquitin-dependent ERAD pathway Hs biological process
retrograde protein transport, ER to cytosol Hs biological process
ubiquitin protein ligase binding Hs molecular function
negative regulation of type I interferon production Hs biological process
VCP-NPL4-UFD1 AAA ATPase complex Hs cellular component
UFD1-NPL4 complex Hs cellular component
nuclear outer membrane-endoplasmic reticulum membrane network Hs cellular component
ubiquitin binding Hs molecular function
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
metal ion binding Hs molecular function

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 543 0.0
nucleus Hs cellular component 543 0.0
nucleoplasm Hs cellular component 543 0.0
cytoplasm Hs cellular component 543 0.0
endoplasmic reticulum Hs cellular component 543 0.0
cytosol Hs cellular component 543 0.0
ubiquitin protein ligase binding Hs molecular function 543 0.0
VCP-NPL4-UFD1 AAA ATPase complex Hs cellular component 543 0.0
UFD1-NPL4 complex Hs cellular component 543 0.0
nuclear outer membrane-endoplasmic reticulum membrane network Hs cellular component 543 0.0
ubiquitin binding Hs molecular function 543 0.0
metal ion binding Hs molecular function 543 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ubiquitin-dependent protein catabolic process PIRSF biological process 1.6E-148