Gene Card
Best human hits
NSUN5; NSUN7; RPL10A
Species
Unique Gene ID
Phmamm.g00010476
Gene Model ID
Phmamm.CG.MTP2014.S603.g10476
Location
S603:3093..16980
Transcript Models and Sequences
Phmamm.CG.MTP2014.S603.g10476.01.t
Phmamm.CG.MTP2014.S603.g10476.02.t
Genoscope Yasuo Villefranche
1 result
AHC0AAA29YG09
Plate: Plate_29_G09
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L1/biogenesis | CDD | Ribosomal protein L1/ribosomal biogenesis protein |
| Ribosomal_L1_3-a/b-sand | Gene3D | Ribosomal protein L1, 3-layer alpha/beta-sandwich |
| Ribosomal_L1/biogenesis | Pfam | Ribosomal protein L1/ribosomal biogenesis protein |
| Ribosomal_L1_CS | ProSitePatterns | Ribosomal protein L1, conserved site |
| Ribosomal_L1-like | SUPERFAMILY | Ribosomal protein L1-like |
| Ribosomal_L1 | PIRSF | Ribosomal protein L1 |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytosol | Blast | cellular component |
| ribosome | Blast | cellular component |
| focal adhesion | Blast | cellular component |
| membrane | Blast | cellular component |
| transferase activity | Orthology | molecular function |
| extracellular exosome | Blast | cellular component |
| metabolic process | Orthology | biological process |
| RNA metabolic process | Blast | biological process |
| intracellular organelle part | Blast | cellular component |
GO (Orthology)
4 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA binding | Hs | molecular function |
| methyltransferase activity | Hs | molecular function |
| transferase activity | Hs | molecular function |
| methylation | Hs | biological process |
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 331 | 1.44e-100 |
| structural constituent of ribosome | Hs | molecular function | 304 | 5.21e-97 |
| protein binding | Hs | molecular function | 304 | 5.21e-97 |
| nucleus | Hs | cellular component | 304 | 5.21e-97 |
| nucleolus | Hs | cellular component | 63.2 | 4.03e-10 |
| cytosol | Hs | cellular component | 304 | 5.21e-97 |
| ribosome | Hs | cellular component | 304 | 5.21e-97 |
| focal adhesion | Hs | cellular component | 304 | 5.21e-97 |
| methyltransferase activity | Hs | molecular function | 331 | 1.44e-100 |
| RNA methyltransferase activity | Hs | molecular function | 63.2 | 4.03e-10 |
| S-adenosylmethionine-dependent methyltransferase activity | Hs | molecular function | 63.2 | 4.03e-10 |
| large ribosomal subunit | Hs | cellular component | 304 | 5.21e-97 |
| membrane | Hs | cellular component | 304 | 5.21e-97 |
| transferase activity | Hs | molecular function | 331 | 1.44e-100 |
| cytosolic large ribosomal subunit | Hs | cellular component | 304 | 5.21e-97 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 304 | 5.21e-97 |
| polysomal ribosome | Hs | cellular component | 304 | 5.21e-97 |
| extracellular exosome | Hs | cellular component | 304 | 5.21e-97 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA binding | PIRSF | molecular function | 5.4E-49 |
| structural constituent of ribosome | PIRSF | molecular function | 5.4E-49 |
| translation | PIRSF | biological process | 5.4E-49 |
| large ribosomal subunit | PIRSF | cellular component | 5.4E-49 |
