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GENE CARD

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Gene Card

Best human hits

ANGEL1; ANGEL2; PDE12

Species

P.mammillata

Unique Gene ID

Phmamm.g00002187

Gene Model ID

Phmamm.CG.MTP2014.S60.g02187

Location

S60:260286..260995

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S60.g02187.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA15YJ24

Plate: Plate_15_J24

AHC0AAA77YN06

Plate: Plate_77_N06

AHC0AAA79YM05

Plate: Plate_79_M05

AHC0AAA80YH07

Plate: Plate_80_H07

AHC0AAA105YF05

Plate: Plate_105_F05

AHC0AAA119YK19

Plate: Plate_119_K19

AHC0AAA84YP22

Plate: Plate_84_P22

AHC0AAA158YK13

Plate: Plate_158_K13

AHC0AAA164YH19

Plate: Plate_164_H19

AHC0AAA171YD02

Plate: Plate_171_D02

AHC0AAA208YN20

Plate: Plate_208_N20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Endo/exonu/phosph_ase_sf SUPERFAMILY Endonuclease/exonuclease/phosphatase superfamily
Endo/exonu/phosph_ase_sf Gene3D Endonuclease/exonuclease/phosphatase superfamily
Endo/exonuclease/phosphatase Pfam Endonuclease/exonuclease/phosphatase

GOSlim

14 results

GO Term Annotation Origin Type
nucleus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
hydrolase activity Blast molecular function
metal ion binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
RNA metabolic process Blast biological process
RNA binding Blast molecular function
Golgi apparatus part Blast cellular component
protein binding Blast molecular function
nuclear body Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 38.5 0.001
mRNA 3'-UTR binding Hs molecular function 87.4 2.19e-20
nuclease activity Hs molecular function 38.5 0.001
exonuclease activity Hs molecular function 38.5 0.001
poly(A)-specific ribonuclease activity Hs molecular function 38.5 0.001
nucleus Hs cellular component 60.8 3.88e-11
cytoplasm Hs cellular component 87.4 2.19e-20
mitochondrion Hs cellular component 38.5 0.001
mitochondrial matrix Hs cellular component 38.5 0.001
endoplasmic reticulum Hs cellular component 60.8 3.88e-11
cis-Golgi network Hs cellular component 60.8 3.88e-11
cytosol Hs cellular component 60.8 3.88e-11
eukaryotic initiation factor 4E binding Hs molecular function 60.8 3.88e-11
Cajal body Hs cellular component 87.4 2.19e-20
hydrolase activity Hs molecular function 38.5 0.001
protein domain specific binding Hs molecular function 60.8 3.88e-11
metal ion binding Hs molecular function 38.5 0.001
perinuclear region of cytoplasm Hs cellular component 60.8 3.88e-11

GO (InterProScan)

No result

GO Term Analysis Type e-value