Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S5...'

Gene Card

Best human hits

MGAM; SI

Species

P.mammillata

Unique Gene ID

Phmamm.g00002142

Gene Model ID

Phmamm.CG.MTP2014.S59.g02142

Location

S59:187147..201916

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S59.g02142.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
P_trefoil_dom ProSiteProfiles P-type trefoil domain
Glyco_hydro_31_CS ProSitePatterns Glycosyl hydrolases family 31, conserved site
P_trefoil_dom CDD P-type trefoil domain
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_31 Pfam Glycoside hydrolase family 31
P_trefoil_dom SMART P-type trefoil domain
Glyco_hydro_31_N_dom Pfam Glycoside hydrolase family 31, N-terminal domain
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Gal_mutarotase_N Pfam Galactose mutarotase, N-terminal barrel
Glyco_hydro_31_AS ProSitePatterns Glycosyl hydrolases family 31, active site
P_trefoil_dom Pfam P-type trefoil domain
Gal_mutarotase_sf_dom SUPERFAMILY Galactose mutarotase-like domain superfamily

GOSlim

17 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
brush border Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
hydrolase activity Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
cellular metabolic process Blast biological process
organic substance metabolic process Blast biological process
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
catalytic activity Hs molecular function 694 0.0
glucan 1,4-alpha-glucosidase activity Hs molecular function 694 0.0
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 694 0.0
alpha-1,4-glucosidase activity Hs molecular function 694 0.0
oligo-1,6-glucosidase activity Hs molecular function 659 0.0
sucrose alpha-glucosidase activity Hs molecular function 659 0.0
Golgi apparatus Hs cellular component 659 0.0
plasma membrane Hs cellular component 694 0.0
brush border Hs cellular component 659 0.0
membrane Hs cellular component 694 0.0
integral component of membrane Hs cellular component 694 0.0
amylase activity Hs molecular function 694 0.0
apical plasma membrane Hs cellular component 694 0.0
hydrolase activity Hs molecular function 694 0.0
hydrolase activity, acting on glycosyl bonds Hs molecular function 694 0.0
carbohydrate binding Hs molecular function 694 0.0
maltose alpha-glucosidase activity Hs molecular function 694 0.0
extracellular exosome Hs cellular component 694 0.0
tertiary granule membrane Hs cellular component 694 0.0
alpha-glucosidase activity Hs molecular function 694 0.0
ficolin-1-rich granule membrane Hs cellular component 694 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
catalytic activity SUPERFAMILY molecular function 2.2E-36
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 4.0E-139
carbohydrate metabolic process Pfam biological process 4.0E-139
carbohydrate binding SUPERFAMILY molecular function 2.2E-36