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GENE CARD

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Gene Card

Best human hits

DMRT1; DMRTA1; DMRTA2

Species

P.mammillata

Unique Gene ID

Phmamm.g00010053

Gene Model ID

Phmamm.CG.MTP2014.S558.g10053

Location

S558:46228..50345

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA30YC17

Plate: Plate_30_C17

AHC0AAA30YD01

Plate: Plate_30_D01

AHC0AAA95YH14

Plate: Plate_95_H14

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
DM_DNA-bd SMART DM DNA-binding domain
DM_DNA-bd ProSitePatterns DM DNA-binding domain
DMA Pfam DMRTA motif
DM_DNA-bd Pfam DM DNA-binding domain
DM_DNA-bd_sf Gene3D DM DNA-binding domain superfamily
DMRT/dsx/mab-3 PANTHER DMRT/protein doublesex/protein male abnormal 3
DM_DNA-bd ProSiteProfiles DM DNA-binding domain
DM_DNA-bd_sf SUPERFAMILY DM DNA-binding domain superfamily

GOSlim

16 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
core promoter proximal region sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
sequence-specific DNA binding Blast molecular function
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 116 2.66e-28
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 169 1.29e-45
core promoter proximal region sequence-specific DNA binding Hs molecular function 116 2.66e-28
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 116 2.66e-28
DNA binding Hs molecular function 169 1.29e-45
chromatin binding Hs molecular function 116 2.66e-28
transcription factor activity, sequence-specific DNA binding Hs molecular function 169 1.29e-45
protein binding Hs molecular function 169 1.29e-45
nucleus Hs cellular component 169 1.29e-45
cytoplasm Hs cellular component 116 2.66e-28
identical protein binding Hs molecular function 116 2.66e-28
protein homodimerization activity Hs molecular function 169 1.29e-45
sequence-specific DNA binding Hs molecular function 169 1.29e-45
metal ion binding Hs molecular function 169 1.29e-45
protein heterodimerization activity Hs molecular function 169 1.29e-45

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 2.1E-65
nucleus PANTHER cellular component 2.1E-65
regulation of transcription, DNA-templated PANTHER biological process 2.1E-65
sequence-specific DNA binding SMART molecular function 5.8E-28