- Gene 'Phmamm.CG.MTP2014.S5...'
Gene Card
Best human hits
TRIM54; TRIM55; TRIM63
Species
Unique Gene ID
Phmamm.g00018799
Gene Model ID
Phmamm.CG.MTP2014.S5471.g18799
Location
S5471:221..4207
Transcript Models and Sequences
Phmamm.CG.MTP2014.S5471.g18799.01.t
Phmamm.CG.MTP2014.S5471.g18799.02.t
Genoscope Yasuo Villefranche
6 results
AHC0AAA115YA15
Plate: Plate_115_A15
AHC0AAA115YO10
Plate: Plate_115_O10
AHC0AAA116YL12
Plate: Plate_116_L12
AHC0AAA136YP14
Plate: Plate_136_P14
AHC0AAA227YM12
Plate: Plate_227_M12
AHC0AAA234YD19
Plate: Plate_234_D19
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| Znf-RING_LisH | Pfam | RING-type zinc-finger, LisH dimerisation motif |
| Znf_RING_CS | ProSitePatterns | Zinc finger, RING-type, conserved site |
| Znf_RING | SMART | Zinc finger, RING-type |
| Znf_B-box | CDD | B-box-type zinc finger |
| Znf_B-box | ProSiteProfiles | B-box-type zinc finger |
| Znf_B-box | Pfam | B-box-type zinc finger |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| ubiquitin-protein transferase activity | Blast | molecular function |
| signal transducer activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| microtubule | Blast | cellular component |
| microtubule binding | Blast | molecular function |
| zinc ion binding | Blast | molecular function |
| transferase activity | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| cytoskeletal part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| microtubule cytoskeleton | Blast | cellular component |
| organelle part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ubiquitin-protein transferase activity | Hs | molecular function | 95.1 | 1.08e-22 |
| signal transducer activity | Hs | molecular function | 105 | 1.18e-25 |
| protein binding | Hs | molecular function | 105 | 1.18e-25 |
| intracellular | Hs | cellular component | 105 | 1.18e-25 |
| nucleus | Hs | cellular component | 105 | 1.18e-25 |
| cytoplasm | Hs | cellular component | 105 | 1.18e-25 |
| cytoskeleton | Hs | cellular component | 91.7 | 3.23e-21 |
| microtubule | Hs | cellular component | 105 | 1.18e-25 |
| microtubule associated complex | Hs | cellular component | 91.7 | 3.23e-21 |
| microtubule binding | Hs | molecular function | 91.7 | 3.23e-21 |
| zinc ion binding | Hs | molecular function | 105 | 1.18e-25 |
| transferase activity | Hs | molecular function | 95.1 | 1.08e-22 |
| Z disc | Hs | cellular component | 95.1 | 1.08e-22 |
| M band | Hs | cellular component | 95.1 | 1.08e-22 |
| titin binding | Hs | molecular function | 95.1 | 1.08e-22 |
| identical protein binding | Hs | molecular function | 105 | 1.18e-25 |
| contractile fiber | Hs | cellular component | 95.1 | 1.08e-22 |
| metal ion binding | Hs | molecular function | 105 | 1.18e-25 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| intracellular | Pfam | cellular component | 2.5E-6 |
| zinc ion binding | Pfam | molecular function | 2.5E-6 |
