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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S5...'

Gene Card

Best human hits

ADSL; FH

Species

P.mammillata

Unique Gene ID

Phmamm.g00009737

Gene Model ID

Phmamm.CG.MTP2014.S523.g09737

Location

S523:37362..43969

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S523.g09737.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA13YE18

Plate: Plate_13_E18

AHC0AAA16YN24

Plate: Plate_16_N24

AHC0AAA32YI18

Plate: Plate_32_I18

AHC0AAA61YO08

Plate: Plate_61_O08

AHC0AAA73YB08

Plate: Plate_73_B08

AHC0AAA73YF15

Plate: Plate_73_F15

AHC0AAA104YB22

Plate: Plate_104_B22

AHC0AAA124YK11

Plate: Plate_124_K11

AHC0AAA152YH10

Plate: Plate_152_H10

AHC0AAA88YE24

Plate: Plate_88_E24

AHC0AAA92YC18

Plate: Plate_92_C18

AHC0AAA163YC08

Plate: Plate_163_C08

AHC0AAA164YL15

Plate: Plate_164_L15

AHC0AAA215YM17

Plate: Plate_215_M17

AHC0AAA92YE20

Plate: Plate_92_E20

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Fumarase/histidase_N Gene3D Fumarase/histidase, N-terminal
Fum_hydII PANTHER Fumarate hydratase, class II
Fumarate_lyase_fam PRINTS Fumarate lyase family
Fumarase_C_C Pfam Fumarase C, C-terminal
Fumarate_lyase_CS ProSitePatterns Fumarate lyase, conserved site
Fum_hydII CDD Fumarate hydratase, class II
L-Aspartase-like SUPERFAMILY L-Aspartase-like
Fumarate_lyase_N Pfam Fumarate lyase, N-terminal
Fum_hydII Hamap Fumarate hydratase, class II

GOSlim

12 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Blast cellular component
extracellular exosome Orthology cellular component
oxidation-reduction process Orthology biological process
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
catalytic activity Hs molecular function
fumarate hydratase activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
tricarboxylic acid cycle Hs biological process
fumarate metabolic process Hs biological process
malate metabolic process Hs biological process
lyase activity Hs molecular function
tricarboxylic acid cycle enzyme complex Hs cellular component
homeostasis of number of cells within a tissue Hs biological process
extracellular exosome Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
catalytic activity Hs molecular function 667 0.0
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Hs molecular function 38.9 0.008
fumarate hydratase activity Hs molecular function 667 0.0
protein binding Hs molecular function 667 0.0
cytoplasm Hs cellular component 667 0.0
mitochondrion Hs cellular component 667 0.0
mitochondrial matrix Hs cellular component 667 0.0
cytosol Hs cellular component 38.9 0.008
lyase activity Hs molecular function 667 0.0
tricarboxylic acid cycle enzyme complex Hs cellular component 667 0.0
extracellular exosome Hs cellular component 667 0.0
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity Hs molecular function 38.9 0.008

GO (InterProScan)

6 results

GO Term Analysis Type e-value
catalytic activity SUPERFAMILY molecular function 3.77E-125
fumarate hydratase activity CDD molecular function 0.0
tricarboxylic acid cycle Pfam biological process 5.5E-27
fumarate metabolic process CDD biological process 0.0
lyase activity Pfam molecular function 5.5E-27
tricarboxylic acid cycle enzyme complex CDD cellular component 0.0