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GENE CARD

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Gene Card

Best human hits

KHDRBS1; KHDRBS2; KHDRBS3

Species

P.mammillata

Unique Gene ID

Phmamm.g00009612

Gene Model ID

Phmamm.CG.MTP2014.S512.g09612

Location

S512:4739..6902

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S512.g09612.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

52 results

AHC0AAA10YG22

Plate: Plate_10_G22

AHC0AAA19YI17

Plate: Plate_19_I17

AHC0AAA26YF08

Plate: Plate_26_F08

AHC0AAA8YD06

Plate: Plate_8_D06

AHC0AAA36YL01

Plate: Plate_36_L01

AHC0AAA42YH10

Plate: Plate_42_H10

AHC0AAA46YH23

Plate: Plate_46_H23

AHC0AAA47YA24

Plate: Plate_47_A24

AHC0AAA50YD20

Plate: Plate_50_D20

AHC0AAA54YH13

Plate: Plate_54_H13

AHC0AAA59YN05

Plate: Plate_59_N05

AHC0AAA64YH06

Plate: Plate_64_H06

AHC0AAA70YE14

Plate: Plate_70_E14

AHC0AAA80YF15

Plate: Plate_80_F15

AHC0AAA102YJ23

Plate: Plate_102_J23

AHC0AAA103YA04

Plate: Plate_103_A04

AHC0AAA105YB10

Plate: Plate_105_B10

AHC0AAA111YI12

Plate: Plate_111_I12

AHC0AAA112YH22

Plate: Plate_112_H22

AHC0AAA117YL14

Plate: Plate_117_L14

AHC0AAA119YI03

Plate: Plate_119_I03

AHC0AAA127YH14

Plate: Plate_127_H14

AHC0AAA153YE20

Plate: Plate_153_E20

AHC0AAA81YI15

Plate: Plate_81_I15

AHC0AAA83YL11

Plate: Plate_83_L11

AHC0AAA94YP16

Plate: Plate_94_P16

AHC0AAA95YI12

Plate: Plate_95_I12

AHC0AAA97YN11

Plate: Plate_97_N11

AHC0AAA99YF15

Plate: Plate_99_F15

AHC0AAA99YK19

Plate: Plate_99_K19

AHC0AAA163YM18

Plate: Plate_163_M18

AHC0AAA164YB06

Plate: Plate_164_B06

AHC0AAA170YM10

Plate: Plate_170_M10

AHC0AAA171YP04

Plate: Plate_171_P04

AHC0AAA173YN03

Plate: Plate_173_N03

AHC0AAA181YP03

Plate: Plate_181_P03

AHC0AAA191YD02

Plate: Plate_191_D02

AHC0AAA193YE23

Plate: Plate_193_E23

AHC0AAA193YM22

Plate: Plate_193_M22

AHC0AAA204YI22

Plate: Plate_204_I22

AHC0AAA205YC08

Plate: Plate_205_C08

AHC0AAA206YL02

Plate: Plate_206_L02

AHC0AAA213YG12

Plate: Plate_213_G12

AHC0AAA215YI05

Plate: Plate_215_I05

AHC0AAA216YG14

Plate: Plate_216_G14

AHC0AAA233YC04

Plate: Plate_233_C04

AHC0AAA237YF17

Plate: Plate_237_F17

AHC0AAA244YL20

Plate: Plate_244_L20

AHC0AAA259YE02

Plate: Plate_259_E02

AHC0AAA266YG07

Plate: Plate_266_G07

AHC0AAA267YP21

Plate: Plate_267_P21

AHC0AAA54YJ15

Plate: Plate_54_J15

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
KH_dom SMART K Homology domain
Qua1_dom Pfam KHDRBS, Qua1 domain
KH_dom_type_1 Pfam K Homology domain, type 1
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily

GOSlim

31 results

GO Term Annotation Origin Type
G2/M transition of mitotic cell cycle Orthology biological process
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
mRNA processing Orthology biological process
cell cycle Orthology biological process
signal transduction Orthology biological process
cell surface receptor signaling pathway Orthology biological process
spermatogenesis Orthology biological process
cell proliferation Orthology biological process
positive regulation of signal transduction Orthology biological process
membrane Orthology cellular component
identical protein binding Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
protein heterodimerization activity Orthology molecular function
protein oligomerization Orthology biological process
positive regulation of gene expression Orthology biological process
translational initiation Orthology biological process
intracellular transport Orthology biological process
organic substance transport Orthology biological process
mRNA splicing, via spliceosome Orthology biological process
regulation of gene expression Orthology biological process
plasma membrane part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
G2/M transition of mitotic cell cycle Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
SH3/SH2 adaptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
mRNA processing Hs biological process
cell cycle Hs biological process
cell cycle arrest Hs biological process
signal transduction Hs biological process
cell surface receptor signaling pathway Hs biological process
spermatogenesis Hs biological process
poly(A) binding Hs molecular function
poly(U) RNA binding Hs molecular function
cell proliferation Hs biological process
positive regulation of signal transduction Hs biological process
membrane Hs cellular component
SH3 domain binding Hs molecular function
protein domain specific binding Hs molecular function
SH2 domain binding Hs molecular function
identical protein binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of translational initiation Hs biological process
positive regulation of RNA export from nucleus Hs biological process
protein heterodimerization activity Hs molecular function
regulation of mRNA splicing, via spliceosome Hs biological process
protein oligomerization Hs biological process
Grb2-Sos complex Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 158 3.30e-44
DNA binding Hs molecular function 158 3.30e-44
RNA binding Hs molecular function 158 3.30e-44
SH3/SH2 adaptor activity Hs molecular function 158 3.30e-44
protein binding Hs molecular function 158 3.30e-44
nucleus Hs cellular component 158 3.30e-44
nucleoplasm Hs cellular component 158 3.30e-44
cytoplasm Hs cellular component 158 3.30e-44
cytosol Hs cellular component 158 3.30e-44
poly(A) binding Hs molecular function 158 3.30e-44
poly(U) RNA binding Hs molecular function 158 3.30e-44
membrane Hs cellular component 158 3.30e-44
SH3 domain binding Hs molecular function 158 3.30e-44
protein domain specific binding Hs molecular function 158 3.30e-44
SH2 domain binding Hs molecular function 141 7.25e-39
identical protein binding Hs molecular function 158 3.30e-44
protein heterodimerization activity Hs molecular function 141 7.25e-39
Grb2-Sos complex Hs cellular component 158 3.30e-44

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 4.6E-5
RNA binding Gene3D molecular function 4.0E-37