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GENE CARD

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Gene Card

Best human hits

FOXA1; FOXA2; FOXA3

Species

P.mammillata

Unique Gene ID

Phmamm.g00001891

Gene Model ID

Phmamm.CG.MTP2014.S50.g01891

Location

S50:173795..175535

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S50.g01891.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

23 results

AHC0AAA14YJ12

Plate: Plate_14_J12

AHC0AAA18YF22

Plate: Plate_18_F22

AHC0AAA2YM24

Plate: Plate_2_M24

AHC0AAA30YL17

Plate: Plate_30_L17

AHC0AAA31YL17

Plate: Plate_31_L17

AHC0AAA38YE13

Plate: Plate_38_E13

AHC0AAA63YL09

Plate: Plate_63_L09

AHC0AAA74YF05

Plate: Plate_74_F05

AHC0AAA104YF09

Plate: Plate_104_F09

AHC0AAA105YI20

Plate: Plate_105_I20

AHC0AAA112YK03

Plate: Plate_112_K03

AHC0AAA140YG17

Plate: Plate_140_G17

AHC0AAA141YC03

Plate: Plate_141_C03

AHC0AAA92YA21

Plate: Plate_92_A21

AHC0AAA99YI02

Plate: Plate_99_I02

AHC0AAA174YP20

Plate: Plate_174_P20

AHC0AAA177YN09

Plate: Plate_177_N09

AHC0AAA182YO20

Plate: Plate_182_O20

AHC0AAA218YP02

Plate: Plate_218_P02

AHC0AAA228YI10

Plate: Plate_228_I10

AHC0AAA260YO10

Plate: Plate_260_O10

AHC0AAA264YG06

Plate: Plate_264_G06

AHC0AAA38YG15

Plate: Plate_38_G15

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Fork-head_N Pfam Fork-head N-terminal
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Forkhead_box_C Pfam Forkhead box protein, C-terminal
Fork_head_dom PRINTS Fork head domain
Fork_head_dom ProSiteProfiles Fork head domain
Fork_head_dom Pfam Fork head domain
TF_fork_head_CS_1 ProSitePatterns Fork head domain conserved site1
Fork_head_dom SMART Fork head domain
TF_fork_head_CS_2 ProSitePatterns Fork head domain conserved site 2
Fork_head_dom CDD Fork head domain

GOSlim

52 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Orthology molecular function
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
Notch signaling pathway Orthology biological process
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
transcription factor binding Orthology molecular function
anatomical structure morphogenesis Orthology biological process
regulation of gene expression Orthology biological process
cell junction Orthology cellular component
cell differentiation Orthology biological process
positive regulation of apoptotic process Orthology biological process
sequence-specific DNA binding Orthology molecular function
transcription regulatory region DNA binding Orthology molecular function
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
nucleolus Orthology cellular component
cellular process Orthology biological process
cell Orthology cellular component
plasma membrane region Orthology cellular component
cell projection Orthology cellular component
cytoskeletal part Orthology cellular component
organelle organization Orthology biological process
cell communication Orthology biological process
cellular response to stress Orthology biological process
animal organ development Orthology biological process
cytoskeleton Orthology cellular component
blood coagulation Orthology biological process
response to lipid Orthology biological process
metabolic process Orthology biological process
regulation of molecular function Orthology biological process
cell development Orthology biological process
neuron differentiation Orthology biological process
cell surface receptor signaling pathway Orthology biological process
positive regulation of signal transduction Orthology biological process
cell cycle Orthology biological process
cellular response to organic substance Orthology biological process
protein transport Orthology biological process
regulation of signaling Orthology biological process
cell-cell signaling Orthology biological process

GO (Orthology)

59 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
fibrillar center Hs cellular component
cellular glucose homeostasis Hs biological process
cell fate specification Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
microvillus Hs cellular component
chromatin organization Hs biological process
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
Notch signaling pathway Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
transcription factor binding Hs molecular function
adult locomotory behavior Hs biological process
cellular response to starvation Hs biological process
anatomical structure morphogenesis Hs biological process
regulation of gene expression Hs biological process
negative regulation of epithelial to mesenchymal transition Hs biological process
actin cytoskeleton Hs cellular component
protein domain specific binding Hs molecular function
cell junction Hs cellular component
cell differentiation Hs biological process
regulation of blood coagulation Hs biological process
lung development Hs biological process
endocrine pancreas development Hs biological process
response to estradiol Hs biological process
tube morphogenesis Hs biological process
positive regulation of embryonic development Hs biological process
hormone metabolic process Hs biological process
glucose homeostasis Hs biological process
positive regulation of apoptotic process Hs biological process
negative regulation of sequence-specific DNA binding transcription factor activity Hs biological process
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
positive regulation of neuron differentiation Hs biological process
positive regulation of smoothened signaling pathway Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of mitotic cell cycle Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
anatomical structure formation involved in morphogenesis Hs biological process
neuron fate specification Hs biological process
positive regulation of sequence-specific DNA binding transcription factor activity Hs biological process
regulation of cell cycle Hs biological process
regulation of insulin secretion involved in cellular response to glucose stimulus Hs biological process
dopaminergic neuron differentiation Hs biological process
primitive streak formation Hs biological process
positive regulation of gastrulation Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 231 2.63e-69
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 231 2.63e-69
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 222 4.74e-66
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 222 4.74e-66
fibrillar center Hs cellular component 222 4.74e-66
DNA binding Hs molecular function 231 2.63e-69
transcription factor activity, sequence-specific DNA binding Hs molecular function 231 2.63e-69
protein binding Hs molecular function 222 4.74e-66
nucleus Hs cellular component 231 2.63e-69
nucleoplasm Hs cellular component 231 2.63e-69
cytoplasm Hs cellular component 231 2.63e-69
microvillus Hs cellular component 222 4.74e-66
transcription factor binding Hs molecular function 231 2.63e-69
actin cytoskeleton Hs cellular component 216 2.89e-65
protein domain specific binding Hs molecular function 231 2.63e-69
cell junction Hs cellular component 231 2.63e-69
sequence-specific DNA binding Hs molecular function 231 2.63e-69
transcription regulatory region DNA binding Hs molecular function 231 2.63e-69

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 6.0E-59
regulation of transcription, DNA-templated SMART biological process 6.0E-59
transcription factor binding Pfam molecular function 1.9E-8
protein domain specific binding Pfam molecular function 1.9E-8
sequence-specific DNA binding SMART molecular function 6.0E-59