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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

CHRD; CHRDL1; CHRDL2

Species

P.mammillata

Unique Gene ID

Phmamm.g00009409

Gene Model ID

Phmamm.CG.MTP2014.S493.g09409

Location

S493:98824..107241

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S493.g09409.01.t
Phmamm.CG.MTP2014.S493.g09409.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA21YC08

Plate: Plate_21_C08

AHC0AAA110YF17

Plate: Plate_110_F17

AHC0AAA240YM12

Plate: Plate_240_M12

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
VWF_dom ProSiteProfiles VWFC domain
VWF_dom ProSitePatterns VWFC domain
CHRD ProSiteProfiles CHRD
CHRD SMART CHRD
VWF_dom SMART VWFC domain
Chordin PIRSF Chordin
VWF_dom Pfam VWFC domain
CHRD Pfam CHRD

GOSlim

21 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Blast cellular component
multicellular organism development Orthology biological process
nervous system development Orthology biological process
central nervous system development Orthology biological process
cell differentiation Orthology biological process
system development Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
cellular response to organic substance Orthology biological process
animal organ development Orthology biological process
cell migration Orthology biological process
negative regulation of signal transduction Orthology biological process
brain development Orthology biological process
cell adhesion Orthology biological process

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
skeletal system development Hs biological process
osteoblast differentiation Hs biological process
gastrulation with mouth forming second Hs biological process
mesoderm formation Hs biological process
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
multicellular organism development Hs biological process
pattern specification process Hs biological process
central nervous system development Hs biological process
heparin binding Hs molecular function
dorsal/ventral pattern formation Hs biological process
cytokine binding Hs molecular function
BMP signaling pathway involved in spinal cord dorsal/ventral patterning Hs biological process
negative regulation of cell migration Hs biological process
negative regulation of BMP signaling pathway Hs biological process
forebrain development Hs biological process
floor plate development Hs biological process
syndecan binding Hs molecular function
negative regulation of osteoblast differentiation Hs biological process
positive regulation of cell adhesion Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 461 3.24e-147
extracellular region Hs cellular component 461 3.24e-147
extracellular space Hs cellular component 461 3.24e-147
cytoplasm Hs cellular component 65.1 1.02e-10
endoplasmic reticulum lumen Hs cellular component 71.6 9.23e-13
heparin binding Hs molecular function 461 3.24e-147
cytokine binding Hs molecular function 461 3.24e-147
syndecan binding Hs molecular function 461 3.24e-147

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding SMART molecular function 3.0E-10
multicellular organism development PIRSF biological process 1.2E-263

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