Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA259YM02

Plate: Plate_259_M02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
FtsH	TIGRFAM	Peptidase, FtsH
Peptidase_M41	Pfam	Peptidase M41
ATPase_AAA_core	Pfam	ATPase, AAA-type, core
Peptidase_M41-like	SUPERFAMILY	Peptidase M41-like
AAA+_ATPase	SMART	AAA+ ATPase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

30 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
metalloendopeptidase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
proteolysis	Orthology	biological process
nervous system development	Orthology	biological process
peptidase activity	Orthology	molecular function
metallopeptidase activity	Orthology	molecular function
zinc ion binding	Orthology	molecular function
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
nuclear body	Blast	cellular component
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
unfolded protein binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
mitochondrial envelope	Orthology	cellular component
metal ion transport	Orthology	biological process
transmembrane transport	Orthology	biological process
organelle organization	Orthology	biological process
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
microtubule-based movement	Orthology	biological process
intracellular transport	Orthology	biological process
cytoplasmic part	Orthology	cellular component
membrane organization	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Blast	molecular function
nucleoside-triphosphatase activity	Blast	molecular function

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
metalloendopeptidase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
m-AAA complex	Hs	cellular component
mitochondrial permeability transition pore complex	Hs	cellular component
proteolysis	Hs	biological process
mitochondrial calcium ion transmembrane transport	Hs	biological process
mitochondrion organization	Hs	biological process
nervous system development	Hs	biological process
anterograde axonal transport	Hs	biological process
peptidase activity	Hs	molecular function
metallopeptidase activity	Hs	molecular function
zinc ion binding	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
hydrolase activity	Hs	molecular function
metal ion binding	Hs	molecular function
regulation of mitochondrial membrane permeability	Hs	biological process
unfolded protein binding	Hs	molecular function
axon cytoplasm	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	522	4.09e-177
ATP-dependent peptidase activity	Hs	molecular function	317	3.02e-98
metalloendopeptidase activity	Hs	molecular function	522	4.09e-177
protein binding	Hs	molecular function	522	4.09e-177
ATP binding	Hs	molecular function	522	4.09e-177
mitochondrion	Hs	cellular component	522	4.09e-177
mitochondrial inner membrane	Hs	cellular component	522	4.09e-177
m-AAA complex	Hs	cellular component	522	4.09e-177
mitochondrial permeability transition pore complex	Hs	cellular component	522	4.09e-177
peptidase activity	Hs	molecular function	522	4.09e-177
metallopeptidase activity	Hs	molecular function	522	4.09e-177
zinc ion binding	Hs	molecular function	522	4.09e-177
membrane	Hs	cellular component	522	4.09e-177
integral component of membrane	Hs	cellular component	522	4.09e-177
nuclear body	Hs	cellular component	317	3.02e-98
hydrolase activity	Hs	molecular function	522	4.09e-177
metal ion binding	Hs	molecular function	522	4.09e-177
unfolded protein binding	Hs	molecular function	522	4.09e-177
axon cytoplasm	Hs	cellular component	522	4.09e-177

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
metalloendopeptidase activity	TIGRFAM	molecular function	4.2E-165
ATP binding	SUPERFAMILY	molecular function	1.02E-56
proteolysis	SUPERFAMILY	biological process	1.02E-56
membrane	TIGRFAM	cellular component	4.2E-165

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences