- Gene 'Phmamm.CG.MTP2014.S4...'
Gene Card
Best human hits
BARHL1; BARHL2; GBX1
Species
Unique Gene ID
Phmamm.g00009313
Gene Model ID
Phmamm.CG.MTP2014.S486.g09313
Location
S486:84034..86704
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA84YE07
Plate: Plate_84_E07
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Homeobox_dom | ProSiteProfiles | Homeobox domain |
| Homeobox_dom | Pfam | Homeobox domain |
| Homeobox_metazoa | PRINTS | Homeobox domain, metazoa |
| Homeobox_dom | CDD | Homeobox domain |
| Homeobox-like_sf | SUPERFAMILY | Homeobox-like domain superfamily |
| Homeobox_dom | SMART | Homeobox domain |
| Homeobox_CS | ProSitePatterns | Homeobox, conserved site |
GOSlim
9 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| sequence-specific DNA binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
9 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 90.5 | 9.56e-21 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 90.5 | 9.56e-21 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 90.5 | 9.56e-21 |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 90.5 | 9.56e-21 |
| DNA binding | Hs | molecular function | 90.5 | 9.56e-21 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 88.6 | 8.81e-20 |
| protein binding | Hs | molecular function | 88.6 | 8.81e-20 |
| nucleus | Hs | cellular component | 90.5 | 9.56e-21 |
| sequence-specific DNA binding | Hs | molecular function | 90.5 | 9.56e-21 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | SMART | molecular function | 5.3E-27 |
| regulation of transcription, DNA-templated | ProSitePatterns | biological process | |
| sequence-specific DNA binding | ProSitePatterns | molecular function |
