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GENE CARD

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Gene Card

Best human hits

PDCD6IP; PTPN23; RHPN1

Species

P.mammillata

Unique Gene ID

Phmamm.g00009310

Gene Model ID

Phmamm.CG.MTP2014.S486.g09310

Location

S486:32753..47621

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S486.g09310.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA25YE17

Plate: Plate_25_E17

AHC0AAA180YL14

Plate: Plate_180_L14

AHC0AAA197YN12

Plate: Plate_197_N12

AHC0AAA248YP08

Plate: Plate_248_P08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
BRO1_dom SMART BRO1 domain
BRO1_dom Pfam BRO1 domain
BRO1_dom ProSiteProfiles BRO1 domain
ALIX_V_dom Pfam ALIX V-shaped domain
BRO1_sf Gene3D BRO1 domain superfamily

GOSlim

44 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
endosome Blast cellular component
early endosome Blast cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
focal adhesion Orthology cellular component
protein dephosphorylation Blast biological process
apoptotic process Orthology biological process
cell cycle Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
dephosphorylation Blast biological process
nuclear body Blast cellular component
hydrolase activity Blast molecular function
protein kinase binding Blast molecular function
cell junction Orthology cellular component
cytoplasmic vesicle Blast cellular component
melanosome Orthology cellular component
protein homodimerization activity Orthology molecular function
cell projection Blast cellular component
myelin sheath Orthology cellular component
protein dimerization activity Orthology molecular function
protein homooligomerization Orthology biological process
cell division Orthology biological process
extracellular exosome Orthology cellular component
extracellular vesicle Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
plasma membrane part Orthology cellular component
microtubule-based process Orthology biological process
receptor binding Orthology molecular function
cytoskeletal part Orthology cellular component
cellular process Orthology biological process
endoplasmic reticulum part Orthology cellular component
midbody Orthology cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component
cell projection part Blast cellular component

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
mitotic cytokinesis Hs biological process
actomyosin contractile ring assembly Hs biological process
cell separation after cytokinesis Hs biological process
immunological synapse Hs cellular component
protein binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
bicellular tight junction Hs cellular component
focal adhesion Hs cellular component
apoptotic process Hs biological process
cell cycle Hs biological process
regulation of centrosome duplication Hs biological process
protein transport Hs biological process
membrane Hs cellular component
viral process Hs biological process
cell junction Hs cellular component
proteinase activated receptor binding Hs molecular function
multivesicular body assembly Hs biological process
melanosome Hs cellular component
actomyosin Hs cellular component
protein homodimerization activity Hs molecular function
myelin sheath Hs cellular component
maintenance of epithelial cell apical/basal polarity Hs biological process
protein dimerization activity Hs molecular function
calcium-dependent protein binding Hs molecular function
protein homooligomerization Hs biological process
cell division Hs biological process
extracellular exosome Hs cellular component
bicellular tight junction assembly Hs biological process
endoplasmic reticulum exit site Hs cellular component
Flemming body Hs cellular component
extracellular vesicle Hs cellular component

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
immunological synapse Hs cellular component 546 0.0
phosphoprotein phosphatase activity Hs molecular function 185 9.84e-48
protein tyrosine phosphatase activity Hs molecular function 185 9.84e-48
protein binding Hs molecular function 546 0.0
extracellular region Hs cellular component 546 0.0
nucleus Hs cellular component 185 9.84e-48
nucleoplasm Hs cellular component 185 9.84e-48
cytoplasm Hs cellular component 546 0.0
endosome Hs cellular component 185 9.84e-48
early endosome Hs cellular component 185 9.84e-48
microtubule organizing center Hs cellular component 546 0.0
cytosol Hs cellular component 546 0.0
cytoskeleton Hs cellular component 546 0.0
bicellular tight junction Hs cellular component 546 0.0
focal adhesion Hs cellular component 546 0.0
cilium Hs cellular component 185 9.84e-48
membrane Hs cellular component 546 0.0
nuclear body Hs cellular component 185 9.84e-48
hydrolase activity Hs molecular function 185 9.84e-48
phosphatase activity Hs molecular function 185 9.84e-48
protein kinase binding Hs molecular function 185 9.84e-48
cell junction Hs cellular component 546 0.0
cytoplasmic vesicle Hs cellular component 185 9.84e-48
proteinase activated receptor binding Hs molecular function 546 0.0
ciliary basal body Hs cellular component 185 9.84e-48
melanosome Hs cellular component 546 0.0
actomyosin Hs cellular component 546 0.0
protein homodimerization activity Hs molecular function 546 0.0
cell projection Hs cellular component 185 9.84e-48
myelin sheath Hs cellular component 546 0.0
protein dimerization activity Hs molecular function 546 0.0
calcium-dependent protein binding Hs molecular function 546 0.0
extracellular exosome Hs cellular component 546 0.0
endoplasmic reticulum exit site Hs cellular component 546 0.0
Flemming body Hs cellular component 546 0.0
extracellular vesicle Hs cellular component 546 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 5.2E-73