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Gene Card

Best human hits

ITGA3; ITGA6; ITGA7

Species

P.mammillata

Unique Gene ID

Phmamm.g00001770

Gene Model ID

Phmamm.CG.MTP2014.S46.g01770

Location

S46:286129..298094

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S46.g01770.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA51YF05

Plate: Plate_51_F05

AHC0AAA61YE19

Plate: Plate_61_E19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Integrin_dom_sf SUPERFAMILY Integrin domain superfamily
Integrin_alpha PRINTS Integrin alpha chain
Integrin_alpha-2 Pfam Integrin alpha-2
Int_alpha_beta-p SMART Integrin alpha beta-propellor
Integrin_alpha_N Gene3D Integrin alpha, N-terminal
FG-GAP Pfam FG-GAP repeat
Int_alpha_beta-p ProSiteProfiles Integrin alpha beta-propellor

GOSlim

33 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
protein binding Blast molecular function
plasma membrane Blast cellular component
focal adhesion Blast cellular component
cell adhesion InterProScan biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
cell junction Blast cellular component
cell projection Blast cellular component
synapse Blast cellular component
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
cell periphery Blast cellular component
synaptic membrane Blast cellular component
enzyme binding Blast molecular function
macromolecular complex binding Blast molecular function
extracellular region part Blast cellular component
adherens junction Blast cellular component
integral component of plasma membrane Blast cellular component
macromolecular complex Blast cellular component
plasma membrane part Blast cellular component
cell-substrate junction Blast cellular component
plasma membrane region Blast cellular component
cytoskeletal part Blast cellular component
cell projection part Blast cellular component
axon Blast cellular component
cell projection membrane Blast cellular component
cell part Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fibronectin binding Hs molecular function 288 5.26e-83
protease binding Hs molecular function 288 5.26e-83
integrin binding Hs molecular function 392 2.46e-120
protein binding Hs molecular function 392 2.46e-120
collagen binding Hs molecular function 288 5.26e-83
basement membrane Hs cellular component 392 2.46e-120
plasma membrane Hs cellular component 392 2.46e-120
cell-cell adherens junction Hs cellular component 392 2.46e-120
focal adhesion Hs cellular component 392 2.46e-120
integrin complex Hs cellular component 392 2.46e-120
external side of plasma membrane Hs cellular component 392 2.46e-120
basal plasma membrane Hs cellular component 392 2.46e-120
cell surface Hs cellular component 392 2.46e-120
membrane Hs cellular component 392 2.46e-120
integral component of membrane Hs cellular component 392 2.46e-120
basolateral plasma membrane Hs cellular component 392 2.46e-120
protein domain specific binding Hs molecular function 288 5.26e-83
cell junction Hs cellular component 288 5.26e-83
hemidesmosome Hs cellular component 392 2.46e-120
filopodium Hs cellular component 392 2.46e-120
growth cone Hs cellular component 288 5.26e-83
filopodium membrane Hs cellular component 288 5.26e-83
insulin-like growth factor I binding Hs molecular function 392 2.46e-120
integrin alpha3-beta1 complex Hs cellular component 288 5.26e-83
integrin alpha6-beta4 complex Hs cellular component 392 2.46e-120
neuregulin binding Hs molecular function 392 2.46e-120
cell projection Hs cellular component 288 5.26e-83
receptor complex Hs cellular component 288 5.26e-83
laminin binding Hs molecular function 392 2.46e-120
basal part of cell Hs cellular component 392 2.46e-120
synapse Hs cellular component 288 5.26e-83
cadherin binding Hs molecular function 392 2.46e-120
metal ion binding Hs molecular function 392 2.46e-120
protein heterodimerization activity Hs molecular function 288 5.26e-83
perinuclear region of cytoplasm Hs cellular component 288 5.26e-83
excitatory synapse Hs cellular component 288 5.26e-83
extracellular exosome Hs cellular component 288 5.26e-83
invadopodium membrane Hs cellular component 288 5.26e-83
cell periphery Hs cellular component 288 5.26e-83
synaptic membrane Hs cellular component 288 5.26e-83

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cell adhesion PRINTS biological process 3.6E-51
integrin complex PRINTS cellular component 3.6E-51

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