Gene Card
Best human hits
ARFGEF1; ARFGEF2; FBXO8
Species
Unique Gene ID
Phmamm.g00008967
Gene Model ID
Phmamm.CG.MTP2014.S458.g08967
Location
S458:14418..17880
Transcript Models and Sequences
Genoscope Yasuo Villefranche
17 results
AHC0AAA10YA06
Plate: Plate_10_A06
AHC0AAA11YK11
Plate: Plate_11_K11
AHC0AAA45YI05
Plate: Plate_45_I05
AHC0AAA72YD15
Plate: Plate_72_D15
AHC0AAA74YN03
Plate: Plate_74_N03
AHC0AAA101YG09
Plate: Plate_101_G09
AHC0AAA149YF23
Plate: Plate_149_F23
AHC0AAA83YJ18
Plate: Plate_83_J18
AHC0AAA159YL11
Plate: Plate_159_L11
AHC0AAA174YO01
Plate: Plate_174_O01
AHC0AAA178YI17
Plate: Plate_178_I17
AHC0AAA214YN17
Plate: Plate_214_N17
AHC0AAA220YP18
Plate: Plate_220_P18
AHC0AAA224YM23
Plate: Plate_224_M23
AHC0AAA256YC18
Plate: Plate_256_C18
AHC0AAA262YN11
Plate: Plate_262_N11
AHC0AAA266YD07
Plate: Plate_266_D07
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Sec7_dom | ProSiteProfiles | Sec7 domain |
| F-box-like_dom_sf | SUPERFAMILY | F-box-like domain superfamily |
| Sec7_dom_sf | SUPERFAMILY | Sec7 domain superfamily |
| F-box_dom | ProSiteProfiles | F-box domain |
| Sec7_C_sf | Gene3D | Sec7, C-terminal domain superfamily |
| Sec7_dom | SMART | Sec7 domain |
| Sec7_dom | Pfam | Sec7 domain |
GOSlim
38 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| Golgi membrane | Blast | cellular component |
| binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| endosome | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| microtubule organizing center | Blast | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| membrane | Blast | cellular component |
| cell junction | Blast | cellular component |
| cytoplasmic vesicle | Blast | cellular component |
| cell projection | Blast | cellular component |
| synapse | Blast | cellular component |
| perinuclear region of cytoplasm | Blast | cellular component |
| regulation of molecular function | Orthology | biological process |
| intracellular part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| enzyme binding | Orthology | molecular function |
| molecular function regulator | Orthology | molecular function |
| proteolysis | Orthology | biological process |
| small GTPase mediated signal transduction | Orthology | biological process |
| regulation of signal transduction | Orthology | biological process |
| Golgi apparatus part | Blast | cellular component |
| cell projection part | Blast | cellular component |
| microtubule | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| nuclear part | Blast | cellular component |
| organelle | Blast | cellular component |
| postsynapse | Blast | cellular component |
| neuron part | Blast | cellular component |
| receptor binding | Blast | molecular function |
GO (Orthology)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ubiquitin ligase complex | Hs | cellular component |
| guanyl-nucleotide exchange factor activity | Hs | molecular function |
| ARF guanyl-nucleotide exchange factor activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| ubiquitin-dependent protein catabolic process | Hs | biological process |
| regulation of ARF protein signal transduction | Hs | biological process |
| regulation of molecular function | Hs | biological process |
GO (Blast)
33 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 80.5 | 2.04e-16 |
| ubiquitin ligase complex | Hs | cellular component | 303 | 2.37e-102 |
| guanyl-nucleotide exchange factor activity | Hs | molecular function | 303 | 2.37e-102 |
| ARF guanyl-nucleotide exchange factor activity | Hs | molecular function | 303 | 2.37e-102 |
| binding | Hs | molecular function | 80.5 | 2.04e-16 |
| protein binding | Hs | molecular function | 303 | 2.37e-102 |
| nucleus | Hs | cellular component | 79.7 | 2.99e-16 |
| nucleoplasm | Hs | cellular component | 79.7 | 2.99e-16 |
| nucleolus | Hs | cellular component | 79.7 | 2.99e-16 |
| cytoplasm | Hs | cellular component | 80.5 | 2.04e-16 |
| endosome | Hs | cellular component | 80.5 | 2.04e-16 |
| Golgi apparatus | Hs | cellular component | 80.5 | 2.04e-16 |
| trans-Golgi network | Hs | cellular component | 80.5 | 2.04e-16 |
| microtubule organizing center | Hs | cellular component | 80.5 | 2.04e-16 |
| cytosol | Hs | cellular component | 80.5 | 2.04e-16 |
| cytoskeleton | Hs | cellular component | 80.5 | 2.04e-16 |
| axonemal microtubule | Hs | cellular component | 80.5 | 2.04e-16 |
| membrane | Hs | cellular component | 80.5 | 2.04e-16 |
| nuclear matrix | Hs | cellular component | 79.7 | 2.99e-16 |
| myosin binding | Hs | molecular function | 80.5 | 2.04e-16 |
| cell junction | Hs | cellular component | 80.5 | 2.04e-16 |
| dendrite | Hs | cellular component | 80.5 | 2.04e-16 |
| small nuclear ribonucleoprotein complex | Hs | cellular component | 79.7 | 2.99e-16 |
| cytoplasmic vesicle | Hs | cellular component | 80.5 | 2.04e-16 |
| asymmetric synapse | Hs | cellular component | 80.5 | 2.04e-16 |
| symmetric synapse | Hs | cellular component | 80.5 | 2.04e-16 |
| protein kinase A regulatory subunit binding | Hs | molecular function | 80.5 | 2.04e-16 |
| cell projection | Hs | cellular component | 80.5 | 2.04e-16 |
| dendritic spine | Hs | cellular component | 80.5 | 2.04e-16 |
| synapse | Hs | cellular component | 80.5 | 2.04e-16 |
| perinuclear region of cytoplasm | Hs | cellular component | 80.5 | 2.04e-16 |
| GABA receptor binding | Hs | molecular function | 80.5 | 2.04e-16 |
| recycling endosome | Hs | cellular component | 80.5 | 2.04e-16 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ARF guanyl-nucleotide exchange factor activity | SUPERFAMILY | molecular function | 4.84E-37 |
| protein binding | SUPERFAMILY | molecular function | 4.58E-13 |
| regulation of ARF protein signal transduction | SUPERFAMILY | biological process | 4.84E-37 |
