- Gene 'Phmamm.CG.MTP2014.S4...'
Gene Card
Best human hits
CPSF2; CPSF3; INTS11
Species
Unique Gene ID
Phmamm.g00008930
Gene Model ID
Phmamm.CG.MTP2014.S455.g08930
Location
S455:8979..12318
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA237YD14
Plate: Plate_237_D14
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Beta_Casp | Pfam | Beta-Casp domain |
| Beta_Casp | SMART | Beta-Casp domain |
| RNaseH_sf | Gene3D | Ribonuclease H superfamily |
| RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
| RibonucZ/Hydroxyglut_hydro | SUPERFAMILY | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |
| RMMBL | Pfam | Zn-dependent metallo-hydrolase, RNA specificity domain |
| Integrase_cat-core | Pfam | Integrase, catalytic core |
| Integrase_cat-core | ProSiteProfiles | Integrase, catalytic core |
| RibonucZ/Hydroxyglut_hydro | Gene3D | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| nucleic acid binding | InterProScan | molecular function |
| RNA metabolic process | Blast | biological process |
| nucleoplasm part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| nuclear part | Blast | cellular component |
| extracellular space | Blast | cellular component |
| DNA metabolic process | InterProScan | biological process |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 110 | 2.54e-25 |
| nuclease activity | Hs | molecular function | 110 | 2.54e-25 |
| endonuclease activity | Hs | molecular function | 110 | 2.54e-25 |
| endoribonuclease activity | Hs | molecular function | 110 | 2.54e-25 |
| protein binding | Hs | molecular function | 192 | 4.20e-54 |
| nucleus | Hs | cellular component | 192 | 4.20e-54 |
| nucleoplasm | Hs | cellular component | 192 | 4.20e-54 |
| cytoplasm | Hs | cellular component | 192 | 4.20e-54 |
| cytosol | Hs | cellular component | 192 | 4.20e-54 |
| mRNA cleavage and polyadenylation specificity factor complex | Hs | cellular component | 110 | 2.54e-25 |
| 5'-3' exonuclease activity | Hs | molecular function | 110 | 2.54e-25 |
| membrane | Hs | cellular component | 38.9 | 0.009 |
| hydrolase activity | Hs | molecular function | 192 | 4.20e-54 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 110 | 2.54e-25 |
| integrator complex | Hs | cellular component | 192 | 4.20e-54 |
| metal ion binding | Hs | molecular function | 110 | 2.54e-25 |
| blood microparticle | Hs | cellular component | 192 | 4.20e-54 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Gene3D | molecular function | 4.3E-12 |
| DNA integration | Pfam | biological process | 8.2E-10 |
