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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

QRICH1; ZMYM2; ZMYM3

Species

P.mammillata

Unique Gene ID

Phmamm.g00008714

Gene Model ID

Phmamm.CG.MTP2014.S437.g08714

Location

S437:20885..23824

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S437.g08714.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

6 results

AHC0AAA38YC05

Plate: Plate_38_C05

AHC0AAA110YH11

Plate: Plate_110_H11

AHC0AAA132YF02

Plate: Plate_132_F02

AHC0AAA228YE03

Plate: Plate_228_E03

AHC0AAA256YN05

Plate: Plate_256_N05

AHC0AAA38YE07

Plate: Plate_38_E07

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Mt_antiviral_sig_pro PANTHER Mitochondrial antiviral-signalling protein

GOSlim

16 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
metal ion binding Blast molecular function
signal transducer activity InterProScan molecular function
mitochondrion InterProScan cellular component
protein kinase activity Blast molecular function
nuclear body Blast cellular component
enzyme binding Blast molecular function
immune system process InterProScan biological process
defense response InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 42.7 2.93e-04
DNA binding Hs molecular function 42.7 2.93e-04
protein tyrosine kinase activity Hs molecular function 40.8 0.001
protein binding Hs molecular function 42.4 3.26e-04
nucleus Hs cellular component 42.7 2.93e-04
nucleoplasm Hs cellular component 42.7 2.93e-04
cytoplasm Hs cellular component 42.7 2.93e-04
cytosol Hs cellular component 40.8 0.001
zinc ion binding Hs molecular function 42.7 2.93e-04
PML body Hs cellular component 40.8 0.001
ubiquitin conjugating enzyme binding Hs molecular function 40.8 0.001
metal ion binding Hs molecular function 42.7 2.93e-04

GO (InterProScan)

3 results

GO Term Analysis Type e-value
signal transducer activity PANTHER molecular function 4.9E-12
mitochondrion PANTHER cellular component 4.9E-12
defense response to virus PANTHER biological process 4.9E-12