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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

MED13; MED13L

Species

P.mammillata

Unique Gene ID

Phmamm.g00018360

Gene Model ID

Phmamm.CG.MTP2014.S4360.g18360

Location

S4360:578..7461

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4360.g18360.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA38YF21

Plate: Plate_38_F21

AHC0AAA77YH23

Plate: Plate_77_H23

AHC0AAA126YJ10

Plate: Plate_126_J10

AHC0AAA87YE11

Plate: Plate_87_E11

AHC0AAA88YP23

Plate: Plate_88_P23

AHC0AAA167YE17

Plate: Plate_167_E17

AHC0AAA38YH23

Plate: Plate_38_H23

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Mediator_Med13 Pfam Mediator complex, subunit Med13

GOSlim

18 results

GO Term Annotation Origin Type
transcription cofactor activity Orthology molecular function
transcription coactivator activity Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transcription initiation from RNA polymerase II promoter Orthology biological process
membrane Orthology cellular component
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
signal transduction Orthology biological process
response to lipid Orthology biological process
cellular response to organic substance Orthology biological process
receptor binding Orthology molecular function
transcription factor binding Orthology molecular function

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription cofactor activity Hs molecular function
transcription cofactor activity Hs molecular function
transcription coactivator activity Hs molecular function
receptor activity Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
membrane Hs cellular component
mediator complex Hs cellular component
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function
intracellular steroid hormone receptor signaling pathway Hs biological process
androgen receptor signaling pathway Hs biological process
cholesterol homeostasis Hs biological process
vitamin D receptor binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
thyroid hormone receptor binding Hs molecular function
triglyceride homeostasis Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription cofactor activity Hs molecular function 385 8.54e-111
transcription cofactor activity Hs molecular function 385 8.54e-111
transcription coactivator activity Hs molecular function 385 8.54e-111
receptor activity Hs molecular function 385 8.54e-111
nucleus Hs cellular component 385 8.54e-111
nucleoplasm Hs cellular component 385 8.54e-111
membrane Hs cellular component 385 8.54e-111
mediator complex Hs cellular component 385 8.54e-111
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 385 8.54e-111
vitamin D receptor binding Hs molecular function 385 8.54e-111
thyroid hormone receptor binding Hs molecular function 385 8.54e-111

GO (InterProScan)

4 results

GO Term Analysis Type e-value
RNA polymerase II transcription cofactor activity Pfam molecular function 4.5E-86
transcription cofactor activity Pfam molecular function 4.5E-86
regulation of transcription from RNA polymerase II promoter Pfam biological process 4.5E-86
mediator complex Pfam cellular component 4.5E-86