Aniseed - Gene card

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Genoscope Yasuo Villefranche

3 results

AHC0AAA249YA23

Plate: Plate_249_A23

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

2 results

Phmamm.REG.CG.MTP2014.S411:119129-121273|ELK REG00001451 [ regulatory_region (enhancer) ]

Phmamm.REG.CG.MTP2014.S411:109256-109999|ELK REG00001452 [ no_output ]

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Ets_dom	ProSitePatterns	Ets domain
Ets_dom	SMART	Ets domain
Ets_dom	Pfam	Ets domain
Ets_dom	ProSiteProfiles	Ets domain
Ets_dom	PRINTS	Ets domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily

GOSlim

36 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
angiogenesis	Orthology	biological process
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
double-stranded DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription cofactor activity	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
signal transduction	Orthology	biological process
cell differentiation	Orthology	biological process
wound healing	Orthology	biological process
neuronal cell body	Orthology	cellular component
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription regulatory region DNA binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
sequence-specific double-stranded DNA binding	Orthology	molecular function
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
synapse part	Orthology	cellular component
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process
positive regulation of cell death	Orthology	biological process

GO (Orthology)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
RNA polymerase II transcription factor binding	Hs	molecular function
angiogenesis	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
double-stranded DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription cofactor activity	Hs	molecular function
transcription corepressor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
signal transduction	Hs	biological process
response to light stimulus	Hs	biological process
cell differentiation	Hs	biological process
dendrite	Hs	cellular component
purine-rich negative regulatory element binding	Hs	molecular function
wound healing	Hs	biological process
neuronal cell body	Hs	cellular component
sequence-specific DNA binding	Hs	molecular function
axon terminus	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
histone H3 deacetylation	Hs	biological process
cellular response to gamma radiation	Hs	biological process
positive regulation of neuron death	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	162	4.88e-43
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	162	4.88e-43
core promoter binding	Hs	molecular function	143	1.25e-36
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	162	4.88e-43
RNA polymerase II transcription factor binding	Hs	molecular function	162	4.88e-43
DNA binding	Hs	molecular function	162	4.88e-43
chromatin binding	Hs	molecular function	162	4.88e-43
double-stranded DNA binding	Hs	molecular function	162	4.88e-43
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	162	4.88e-43
transcription cofactor activity	Hs	molecular function	143	1.25e-36
transcription corepressor activity	Hs	molecular function	144	5.53e-37
protein binding	Hs	molecular function	162	4.88e-43
nucleus	Hs	cellular component	162	4.88e-43
nucleoplasm	Hs	cellular component	162	4.88e-43
cytoplasm	Hs	cellular component	162	4.88e-43
mitochondrion	Hs	cellular component	162	4.88e-43
cytosol	Hs	cellular component	143	1.25e-36
dendrite	Hs	cellular component	162	4.88e-43
purine-rich negative regulatory element binding	Hs	molecular function	144	5.53e-37
neuronal cell body	Hs	cellular component	162	4.88e-43
sequence-specific DNA binding	Hs	molecular function	162	4.88e-43
axon terminus	Hs	cellular component	162	4.88e-43

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	1.4E-55
regulation of transcription, DNA-templated	SMART	biological process	1.4E-55
sequence-specific DNA binding	SMART	molecular function	1.4E-55

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