Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S4...'

Gene Card

Best human hits

VPS53

Species

P.mammillata

Unique Gene ID

Phmamm.g00000179

Gene Model ID

Phmamm.CG.MTP2014.S4.g00179

Location

S4:158747..166608

Transcript Models and Sequences

Phmamm.CG.MTP2014.S4.g00179.01.t
Phmamm.CG.MTP2014.S4.g00179.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA87YF15

Plate: Plate_87_F15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Vps53_N	Pfam	Vps53-like, N-terminal

GOSlim

15 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
endosome	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
protein transport	Orthology	biological process
membrane	Orthology	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
Golgi apparatus part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular transport	Orthology	biological process
Golgi membrane	Orthology	cellular component

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
GARP complex	Hs	cellular component
protein binding	Hs	molecular function
endosome	Hs	cellular component
Golgi apparatus	Hs	cellular component
trans-Golgi network	Hs	cellular component
cytosol	Hs	cellular component
lysosomal transport	Hs	biological process
endosome membrane	Hs	cellular component
protein transport	Hs	biological process
membrane	Hs	cellular component
endocytic recycling	Hs	biological process
trans-Golgi network membrane	Hs	cellular component
retrograde transport, endosome to Golgi	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
recycling endosome	Hs	cellular component
EARP complex	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
GARP complex	Hs	cellular component	966
protein binding	Hs	molecular function	966
endosome	Hs	cellular component	966
Golgi apparatus	Hs	cellular component	966
trans-Golgi network	Hs	cellular component	966
cytosol	Hs	cellular component	966
endosome membrane	Hs	cellular component	966
membrane	Hs	cellular component	966
trans-Golgi network membrane	Hs	cellular component	966
perinuclear region of cytoplasm	Hs	cellular component	966
recycling endosome	Hs	cellular component	966
EARP complex	Hs	cellular component	966

GO (InterProScan)