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GENE CARD

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Gene Card

Best human hits

XPO1; XPOT

Species

P.mammillata

Unique Gene ID

Phmamm.g00008261

Gene Model ID

Phmamm.CG.MTP2014.S395.g08261

Location

S395:120349..130982

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S395.g08261.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA77YF21

Plate: Plate_77_F21

AHC0AAA189YF11

Plate: Plate_189_F11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
ARM-type_fold SUPERFAMILY Armadillo-type fold
ARM-like Gene3D Armadillo-like helical
Exportin-1/Importin-b-like Pfam Exportin-1/Importin-beta-like

GOSlim

24 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
binding Orthology molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nuclear envelope Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
intracellular protein transport Orthology biological process
protein transport Blast biological process
membrane Blast cellular component
nuclear membrane Blast cellular component
macromolecular complex Orthology cellular component
intracellular membrane-bounded organelle Blast cellular component
enzyme binding Orthology molecular function
nuclear lumen Orthology cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
intracellular transport Blast biological process
nuclear outer membrane-endoplasmic reticulum membrane network Blast cellular component
membrane region Blast cellular component
nuclear body Blast cellular component

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA binding Hs molecular function
RNA binding Hs molecular function
binding Hs molecular function
nucleus Hs cellular component
nuclear pore Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
tRNA export from nucleus Hs biological process
intracellular protein transport Hs biological process
Ran GTPase binding Hs molecular function
nuclear matrix Hs cellular component

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 565 0.0
kinetochore Hs cellular component 50.4 3.53e-06
RNA binding Hs molecular function 565 0.0
nuclear export signal receptor activity Hs molecular function 50.4 3.53e-06
transporter activity Hs molecular function 50.4 3.53e-06
binding Hs molecular function 565 0.0
protein binding Hs molecular function 50.4 3.53e-06
intracellular Hs cellular component 50.4 3.53e-06
nucleus Hs cellular component 565 0.0
nuclear envelope Hs cellular component 50.4 3.53e-06
annulate lamellae Hs cellular component 50.4 3.53e-06
nuclear pore Hs cellular component 565 0.0
nucleoplasm Hs cellular component 565 0.0
nucleolus Hs cellular component 50.4 3.53e-06
cytoplasm Hs cellular component 565 0.0
cytosol Hs cellular component 565 0.0
Ran GTPase binding Hs molecular function 565 0.0
protein transporter activity Hs molecular function 50.4 3.53e-06
Cajal body Hs cellular component 50.4 3.53e-06
membrane Hs cellular component 50.4 3.53e-06
nuclear matrix Hs cellular component 565 0.0
protein domain specific binding Hs molecular function 50.4 3.53e-06
intracellular ribonucleoprotein complex Hs cellular component 50.4 3.53e-06
nuclear membrane Hs cellular component 50.4 3.53e-06
macromolecular complex Hs cellular component 50.4 3.53e-06
intracellular membrane-bounded organelle Hs cellular component 50.4 3.53e-06
host cell Hs cellular component 50.4 3.53e-06

GO (InterProScan)

2 results

GO Term Analysis Type e-value
tRNA binding PANTHER molecular function 1.4E-191
binding SUPERFAMILY molecular function 6.53E-48