Aniseed - Gene card

External Database Gene Card

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Genoscope Yasuo Villefranche

70 results

AHC0AAA267YN03

Plate: Plate_267_N03

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
CIR_N_dom	SMART	CBF1-interacting co-repressor CIR, N-terminal domain
CIR_N_dom	Pfam	CBF1-interacting co-repressor CIR, N-terminal domain

GOSlim

25 results

GO Term	Annotation Origin	Type
nucleic acid binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytosol	Blast	cellular component
cytoskeleton	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
mRNA processing	Orthology	biological process
zinc ion binding	Blast	molecular function
RNA splicing	Orthology	biological process
nuclear speck	Orthology	cellular component
protein kinase binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
negative regulation of transcription, DNA-templated	Orthology	biological process
metal ion binding	Blast	molecular function
nucleoplasm part	Orthology	cellular component
endoplasmic reticulum membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytoskeleton	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
nuclear speck	Hs	cellular component
protein kinase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	236	4.23e-74
nucleic acid binding	Hs	molecular function	38.1	0.004
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	236	4.23e-74
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	236	4.23e-74
transcription corepressor activity	Hs	molecular function	236	4.23e-74
RNA binding	Hs	molecular function	38.1	0.004
protein binding	Hs	molecular function	236	4.23e-74
nucleus	Hs	cellular component	236	4.23e-74
cytoplasm	Hs	cellular component	236	4.23e-74
signal recognition particle receptor complex	Hs	cellular component	38.1	0.004
centrosome	Hs	cellular component	236	4.23e-74
microtubule organizing center	Hs	cellular component	236	4.23e-74
cytosol	Hs	cellular component	38.1	0.004
cytoskeleton	Hs	cellular component	236	4.23e-74
zinc ion binding	Hs	molecular function	38.1	0.004
nuclear speck	Hs	cellular component	236	4.23e-74
protein kinase binding	Hs	molecular function	236	4.23e-74
macromolecular complex	Hs	cellular component	236	4.23e-74
metal ion binding	Hs	molecular function	38.1	0.004

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
transcription corepressor activity	PANTHER	molecular function	2.5E-99

Gene Card

Best human hits

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Transcript Models and Sequences