Aniseed - Gene card

External Database Gene Card

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No result

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Genoscope Yasuo Villefranche

2 results

AHC0AAA94YL01

Plate: Plate_94_L01

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40_repeat	SMART	WD40 repeat
TIF_beta_prop-like	Pfam	Translation initiation factor, beta propellor-like domain
WD40_repeat	Pfam	WD40 repeat
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
WD40_repeat	ProSiteProfiles	WD40 repeat
G-protein_beta_WD-40_rep	PRINTS	G-protein beta WD-40 repeat

GOSlim

28 results

GO Term	Annotation Origin	Type
DNA binding	Blast	molecular function
transcription corepressor activity	Blast	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
nuclear speck	Orthology	cellular component
cell projection	Blast	cellular component
transcription regulatory region DNA binding	Blast	molecular function
protein N-terminus binding	Blast	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
transcription from RNA polymerase II promoter	Orthology	biological process
organic substance transport	Orthology	biological process
intracellular transport	Orthology	biological process
intracellular protein transport	Orthology	biological process
gene expression	Orthology	biological process
nucleoplasm part	Blast	cellular component
microtubule	Blast	cellular component
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transcription export complex	Hs	cellular component
THO complex part of transcription export complex	Hs	cellular component
nuclear chromosome, telomeric region	Hs	cellular component
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
termination of RNA polymerase II transcription	Hs	biological process
mRNA processing	Hs	biological process
RNA export from nucleus	Hs	biological process
mRNA export from nucleus	Hs	biological process
RNA splicing	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
nuclear speck	Hs	cellular component
mRNA 3'-end processing	Hs	biological process
mRNA transport	Hs	biological process

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	88.6	2.34e-19
transcription export complex	Hs	cellular component	469	1.59e-167
THO complex part of transcription export complex	Hs	cellular component	469	1.59e-167
nuclear chromosome, telomeric region	Hs	cellular component	469	1.59e-167
DNA binding	Hs	molecular function	88.6	2.34e-19
transcription corepressor activity	Hs	molecular function	88.6	2.34e-19
RNA binding	Hs	molecular function	469	1.59e-167
protein binding	Hs	molecular function	469	1.59e-167
nucleus	Hs	cellular component	469	1.59e-167
nucleoplasm	Hs	cellular component	469	1.59e-167
cytoplasm	Hs	cellular component	85.5	1.62e-18
spindle microtubule	Hs	cellular component	88.6	2.34e-19
cilium	Hs	cellular component	85.5	1.62e-18
beta-catenin binding	Hs	molecular function	88.6	2.34e-19
membrane	Hs	cellular component	469	1.59e-167
integral component of membrane	Hs	cellular component	469	1.59e-167
nuclear speck	Hs	cellular component	469	1.59e-167
transcriptional repressor complex	Hs	cellular component	88.6	2.34e-19
histone binding	Hs	molecular function	88.6	2.34e-19
cell projection	Hs	cellular component	85.5	1.62e-18
transcription regulatory region DNA binding	Hs	molecular function	88.6	2.34e-19
protein N-terminus binding	Hs	molecular function	88.6	2.34e-19

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
transcription export complex	PANTHER	cellular component	2.0E-97
protein binding	SUPERFAMILY	molecular function	2.2E-59

Gene Card

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Transcript Models and Sequences