Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

CPN2; LRIG3; LRRC15

Species

P.mammillata

Unique Gene ID

Phmamm.g00008099

Gene Model ID

Phmamm.CG.MTP2014.S384.g08099

Location

S384:90276..93418

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA216YO06

Plate: Plate_216_O06

AHC0AAA230YI13

Plate: Plate_230_I13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
Leu-rich_rpt Pfam Leucine-rich repeat
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

17 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
enzyme regulator activity Blast molecular function
cytoplasmic vesicle Blast cellular component
extracellular exosome Blast cellular component
metallopeptidase activity Blast molecular function
protein kinase binding Blast molecular function
protein kinase activity Blast molecular function
macromolecular complex binding Blast molecular function
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
extracellular region part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibronectin binding Hs molecular function 108 1.67e-25
metallocarboxypeptidase activity Hs molecular function 119 2.71e-29
protein kinase inhibitor activity Hs molecular function 108 1.67e-25
protein binding Hs molecular function 119 2.71e-29
collagen binding Hs molecular function 108 1.67e-25
extracellular region Hs cellular component 119 2.71e-29
extracellular space Hs cellular component 115 1.52e-27
cytoplasm Hs cellular component 108 1.67e-25
plasma membrane Hs cellular component 115 1.52e-27
membrane Hs cellular component 115 1.52e-27
integral component of membrane Hs cellular component 115 1.52e-27
enzyme regulator activity Hs molecular function 119 2.71e-29
cytoplasmic vesicle membrane Hs cellular component 115 1.52e-27
extracellular matrix Hs cellular component 108 1.67e-25
cytoplasmic vesicle Hs cellular component 115 1.52e-27
laminin binding Hs molecular function 108 1.67e-25
extracellular exosome Hs cellular component 119 2.71e-29
blood microparticle Hs cellular component 119 2.71e-29

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.4E-20