Aniseed - Gene card

Gene Card

Best human hits

HADH

Species

P.mammillata

Unique Gene ID

Phmamm.g00008082

Gene Model ID

Phmamm.CG.MTP2014.S383.g08082

Location

S383:67103..70527

Transcript Models and Sequences

Phmamm.CG.MTP2014.S383.g08082.01.t
Phmamm.CG.MTP2014.S383.g08082.02.t
Phmamm.CG.MTP2014.S383.g08082.03.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term	Analysis	Definition

GOSlim

51 results

GO Term	Annotation Origin	Type
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
mitochondrial matrix	Blast	cellular component
oxidation-reduction process	Blast	biological process
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
multicellular organism development	Orthology	biological process
brain development	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
regulation of gene expression	Orthology	biological process
neuron differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription regulatory region sequence-specific DNA binding	Orthology	molecular function
cell differentiation	Orthology	biological process
animal organ development	Orthology	biological process
vasculature development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
receptor binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
central nervous system development	Orthology	biological process
nervous system development	Orthology	biological process
cell development	Orthology	biological process
regulation of molecular function	Orthology	biological process
cell cycle	Orthology	biological process
positive regulation of catalytic activity	Orthology	biological process
molecular transducer activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
blood vessel morphogenesis	Orthology	biological process
heart development	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cell proliferation	Orthology	biological process
developmental process	Orthology	biological process
catalytic activity	Blast	molecular function
anion binding	Blast	molecular function
nucleotide binding	Blast	molecular function
coenzyme binding	Blast	molecular function

GO (Orthology)

66 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytoplasm	Hs	cellular component
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
cell fate determination	Hs	biological process
kidney development	Hs	biological process
liver development	Hs	biological process
positive regulation of endothelial cell proliferation	Hs	biological process
lymph vessel development	Hs	biological process
lymphangiogenesis	Hs	biological process
lens development in camera-type eye	Hs	biological process
lens morphogenesis in camera-type eye	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
multicellular organism development	Hs	biological process
brain development	Hs	biological process
circadian rhythm	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
regulation of gene expression	Hs	biological process
ligand-dependent nuclear receptor binding	Hs	molecular function
dorsal spinal cord development	Hs	biological process
cerebellar granule cell differentiation	Hs	biological process
neural tube development	Hs	biological process
neuron differentiation	Hs	biological process
skeletal muscle thin filament assembly	Hs	biological process
lung development	Hs	biological process
olfactory placode formation	Hs	biological process
pancreas development	Hs	biological process
response to nutrient levels	Hs	biological process
regulation of circadian rhythm	Hs	biological process
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of viral genome replication	Hs	biological process
positive regulation of cyclin-dependent protein serine/threonine kinase activity	Hs	biological process
positive regulation of cell cycle	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
optic placode formation involved in camera-type eye formation	Hs	biological process
rhythmic process	Hs	biological process
inner ear development	Hs	biological process
venous blood vessel morphogenesis	Hs	biological process
DBD domain binding	Hs	molecular function
LBD domain binding	Hs	molecular function
ventricular cardiac myofibril assembly	Hs	biological process
cardiac muscle cell differentiation	Hs	biological process
ventricular cardiac muscle tissue morphogenesis	Hs	biological process
retina morphogenesis in camera-type eye	Hs	biological process
embryonic retina morphogenesis in camera-type eye	Hs	biological process
endocardium formation	Hs	biological process
positive regulation of sarcomere organization	Hs	biological process
lymphatic endothelial cell differentiation	Hs	biological process
lens fiber cell morphogenesis	Hs	biological process
hepatocyte differentiation	Hs	biological process
hepatocyte proliferation	Hs	biological process
neuronal stem cell population maintenance	Hs	biological process
positive regulation of neural precursor cell proliferation	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
3-hydroxyacyl-CoA dehydrogenase activity	Hs	molecular function	38.9	0.010
nucleoplasm	Hs	cellular component	38.9	0.010
cytoplasm	Hs	cellular component	38.9	0.010
mitochondrion	Hs	cellular component	38.9	0.010
mitochondrial inner membrane	Hs	cellular component	38.9	0.010
mitochondrial matrix	Hs	cellular component	38.9	0.010
oxidoreductase activity	Hs	molecular function	38.9	0.010
NAD+ binding	Hs	molecular function	38.9	0.010

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value