Aniseed - Gene card

Gene Card

Best human hits

SMYD1; SMYD3; SMYD5

Species

P.mammillata

Unique Gene ID

Phmamm.g00007990

Gene Model ID

Phmamm.CG.MTP2014.S376.g07990

Location

S376:82314..89380

Transcript Models and Sequences

Phmamm.CG.MTP2014.S376.g07990.01.t
Phmamm.CG.MTP2014.S376.g07990.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
SET_dom	Pfam	SET domain
SET_dom	ProSiteProfiles	SET domain
SET_dom	SMART	SET domain

GOSlim

15 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
DNA binding	Blast	molecular function
transcription corepressor activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
metabolic process	Orthology	biological process
enzyme binding	Blast	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
organelle organization	Blast	biological process
cellular protein modification process	Blast	biological process

GO (Orthology)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
methylation	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	71.6	1.46e-13
RNA polymerase II core binding	Hs	molecular function	71.6	1.46e-13
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function	71.6	1.46e-13
DNA binding	Hs	molecular function	52.8	1.77e-07
transcription corepressor activity	Hs	molecular function	52.8	1.77e-07
protein binding	Hs	molecular function	399	7.39e-138
nucleus	Hs	cellular component	71.6	1.46e-13
nucleoplasm	Hs	cellular component	71.6	1.46e-13
cytoplasm	Hs	cellular component	71.6	1.46e-13
cytosol	Hs	cellular component	71.6	1.46e-13
methyltransferase activity	Hs	molecular function	399	7.39e-138
transferase activity	Hs	molecular function	399	7.39e-138
histone-lysine N-methyltransferase activity	Hs	molecular function	71.6	1.46e-13
metal ion binding	Hs	molecular function	399	7.39e-138

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Pfam	molecular function	8.5E-14