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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

DUS1L; DUS2; DUS4L

Species

P.mammillata

Unique Gene ID

Phmamm.g00007920

Gene Model ID

Phmamm.CG.MTP2014.S371.g07920

Location

S371:45646..50790

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S371.g07920.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA19YO15

Plate: Plate_19_O15

AHC0AAA58YJ21

Plate: Plate_58_J21

AHC0AAA58YP02

Plate: Plate_58_P02

AHC0AAA59YI21

Plate: Plate_59_I21

AHC0AAA60YI14

Plate: Plate_60_I14

AHC0AAA62YO14

Plate: Plate_62_O14

AHC0AAA106YP17

Plate: Plate_106_P17

AHC0AAA99YN03

Plate: Plate_99_N03

AHC0AAA106YB15

Plate: Plate_106_B15

AHC0AAA179YP20

Plate: Plate_179_P20

AHC0AAA184YC16

Plate: Plate_184_C16

AHC0AAA188YB07

Plate: Plate_188_B07

AHC0AAA193YH20

Plate: Plate_193_H20

AHC0AAA219YF13

Plate: Plate_219_F13

AHC0AAA219YJ01

Plate: Plate_219_J01

AHC0AAA233YI03

Plate: Plate_233_I03

AHC0AAA245YE13

Plate: Plate_245_E13

AHC0AAA269YD10

Plate: Plate_269_D10

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
dsRBD_dom ProSiteProfiles Double-stranded RNA-binding domain
dsRBD_dom SMART Double-stranded RNA-binding domain
tRNA_hU_synthase Pfam tRNA-dihydrouridine synthase
DUS-like_FMN-bd CDD DUS-like, FMN-binding domain
dsRBD_dom Pfam Double-stranded RNA-binding domain
dsRBD_dom CDD Double-stranded RNA-binding domain
tRNA_hU_synthase_CS ProSitePatterns tRNA-dihydrouridine synthase, conserved site
tRNA_hU_synthase PANTHER tRNA-dihydrouridine synthase
Aldolase_TIM Gene3D Aldolase-type TIM barrel

GOSlim

15 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
catalytic activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endoplasmic reticulum Orthology cellular component
cytosol Orthology cellular component
flavin adenine dinucleotide binding Orthology molecular function
oxidation-reduction process Orthology biological process
negative regulation of cell death Orthology biological process
RNA processing Orthology biological process
enzyme regulator activity Orthology molecular function
protein kinase binding Orthology molecular function
protein kinase activity Orthology molecular function
regulation of catalytic activity Orthology biological process

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA dihydrouridine synthesis Hs biological process
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
catalytic activity Hs molecular function
protein kinase inhibitor activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
negative regulation of protein kinase activity Hs biological process
tRNA processing Hs biological process
oxidoreductase activity Hs molecular function
tRNA dihydrouridine synthase activity Hs molecular function
flavin adenine dinucleotide binding Hs molecular function
oxidation-reduction process Hs biological process
negative regulation of cell death Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 476 1.02e-165
double-stranded RNA binding Hs molecular function 476 1.02e-165
catalytic activity Hs molecular function 476 1.02e-165
protein kinase inhibitor activity Hs molecular function 476 1.02e-165
protein binding Hs molecular function 476 1.02e-165
cytoplasm Hs cellular component 476 1.02e-165
mitochondrion Hs cellular component 476 1.02e-165
endoplasmic reticulum Hs cellular component 476 1.02e-165
cytosol Hs cellular component 476 1.02e-165
oxidoreductase activity Hs molecular function 476 1.02e-165
tRNA dihydrouridine synthase activity Hs molecular function 476 1.02e-165
flavin adenine dinucleotide binding Hs molecular function 476 1.02e-165

GO (InterProScan)

5 results

GO Term Analysis Type e-value
catalytic activity Gene3D molecular function 4.1E-66
tRNA processing PANTHER biological process 4.8E-129
tRNA dihydrouridine synthase activity PANTHER molecular function 4.8E-129
flavin adenine dinucleotide binding PANTHER molecular function 4.8E-129
oxidation-reduction process PANTHER biological process 4.8E-129