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GENE CARD

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Gene Card

Best human hits

PPEF1; PPP2CB; PPP5C

Species

P.mammillata

Unique Gene ID

Phmamm.g00007891

Gene Model ID

Phmamm.CG.MTP2014.S368.g07891

Location

S368:39683..46336

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S368.g07891.01.t
Phmamm.CG.MTP2014.S368.g07891.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

13 results

AHC0AAA2YL13

Plate: Plate_2_L13

AHC0AAA22YF11

Plate: Plate_22_F11

AHC0AAA58YG03

Plate: Plate_58_G03

AHC0AAA69YC16

Plate: Plate_69_C16

AHC0AAA116YI20

Plate: Plate_116_I20

AHC0AAA124YP03

Plate: Plate_124_P03

AHC0AAA148YM18

Plate: Plate_148_M18

AHC0AAA87YP02

Plate: Plate_87_P02

AHC0AAA192YE10

Plate: Plate_192_E10

AHC0AAA217YL15

Plate: Plate_217_L15

AHC0AAA242YI20

Plate: Plate_242_I20

AHC0AAA263YF01

Plate: Plate_263_F01

AHC0AAA267YB20

Plate: Plate_267_B20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
TPR_repeat ProSiteProfiles Tetratricopeptide repeat
Calcineurin-like_PHP_ApaH Pfam Calcineurin-like phosphoesterase domain, ApaH type
Ser/Thr-sp_prot-phosphatase SMART Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
Ser/Thr_PPase_5 PANTHER Serine/threonine protein phosphatase 5
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
TPR_1 Pfam Tetratricopeptide repeat 1
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
Metallo-depent_PP-like Gene3D Metallo-dependent phosphatase-like
Ser/Thr-sp_prot-phosphatase PRINTS Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
TPR_repeat SMART Tetratricopeptide repeat
Ser/Thr-sp_prot-phosphatase ProSitePatterns Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
PPP_dom Pfam PPP domain

GOSlim

35 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
signal transducer activity Blast molecular function
iron ion binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
protein dephosphorylation Blast biological process
microtubule binding Blast molecular function
protein C-terminus binding Blast molecular function
membrane Blast cellular component
hydrolase activity Blast molecular function
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
neuron projection Blast cellular component
neuronal cell body Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
cell periphery Blast cellular component
intracellular part Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
binding Blast molecular function
dephosphorylation Blast biological process
transition metal ion binding Blast molecular function
anion binding Blast molecular function
adenyl ribonucleotide binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein phosphatase type 2A complex Hs cellular component 219 1.20e-67
chromosome, centromeric region Hs cellular component 219 1.20e-67
spindle pole Hs cellular component 219 1.20e-67
G-protein alpha-subunit binding Hs molecular function 702 0.0
RNA binding Hs molecular function 702 0.0
phosphoprotein phosphatase activity Hs molecular function 702 0.0
protein serine/threonine phosphatase activity Hs molecular function 702 0.0
signal transducer activity Hs molecular function 702 0.0
iron ion binding Hs molecular function 237 7.66e-71
calcium ion binding Hs molecular function 237 7.66e-71
protein binding Hs molecular function 702 0.0
ATP binding Hs molecular function 702 0.0
nucleus Hs cellular component 702 0.0
nucleoplasm Hs cellular component 702 0.0
chromosome Hs cellular component 219 1.20e-67
cytoplasm Hs cellular component 702 0.0
cytosol Hs cellular component 702 0.0
cytoskeleton Hs cellular component 219 1.20e-67
plasma membrane Hs cellular component 702 0.0
microtubule binding Hs molecular function 702 0.0
protein C-terminus binding Hs molecular function 219 1.20e-67
lipid binding Hs molecular function 702 0.0
membrane Hs cellular component 702 0.0
hydrolase activity Hs molecular function 702 0.0
phosphatase activity Hs molecular function 702 0.0
manganese ion binding Hs molecular function 237 7.66e-71
heat shock protein binding Hs molecular function 702 0.0
macromolecular complex Hs cellular component 702 0.0
identical protein binding Hs molecular function 702 0.0
neuron projection Hs cellular component 702 0.0
neuronal cell body Hs cellular component 702 0.0
perikaryon Hs cellular component 702 0.0
intracellular membrane-bounded organelle Hs cellular component 702 0.0
ADP binding Hs molecular function 702 0.0
metal ion binding Hs molecular function 702 0.0
Hsp90 protein binding Hs molecular function 702 0.0
extracellular exosome Hs cellular component 219 1.20e-67
cell periphery Hs cellular component 702 0.0
proximal dendrite Hs cellular component 702 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
phosphoprotein phosphatase activity PANTHER molecular function 3.9E-162
protein binding Gene3D molecular function 1.1E-55
protein dephosphorylation PANTHER biological process 3.9E-162
hydrolase activity SMART molecular function 8.8E-138

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