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GENE CARD

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Gene Card

Best human hits

RBM14; RBM4; RBM4B

Species

P.mammillata

Unique Gene ID

Phmamm.g00001354

Gene Model ID

Phmamm.CG.MTP2014.S34.g01354

Location

S34:350085..352624

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

39 results

AHC0AAA13YB12

Plate: Plate_13_B12

AHC0AAA2YK14

Plate: Plate_2_K14

AHC0AAA4YM21

Plate: Plate_4_M21

AHC0AAA8YM14

Plate: Plate_8_M14

AHC0AAA35YO08

Plate: Plate_35_O08

AHC0AAA39YM12

Plate: Plate_39_M12

AHC0AAA49YF05

Plate: Plate_49_F05

AHC0AAA64YO04

Plate: Plate_64_O04

AHC0AAA101YA01

Plate: Plate_101_A01

AHC0AAA102YI08

Plate: Plate_102_I08

AHC0AAA107YI11

Plate: Plate_107_I11

AHC0AAA117YA20

Plate: Plate_117_A20

AHC0AAA117YC21

Plate: Plate_117_C21

AHC0AAA136YB02

Plate: Plate_136_B02

AHC0AAA141YC15

Plate: Plate_141_C15

AHC0AAA143YA07

Plate: Plate_143_A07

AHC0AAA84YG13

Plate: Plate_84_G13

AHC0AAA86YM17

Plate: Plate_86_M17

AHC0AAA162YC21

Plate: Plate_162_C21

AHC0AAA166YH20

Plate: Plate_166_H20

AHC0AAA166YJ13

Plate: Plate_166_J13

AHC0AAA188YK19

Plate: Plate_188_K19

AHC0AAA194YM01

Plate: Plate_194_M01

AHC0AAA201YO10

Plate: Plate_201_O10

AHC0AAA202YB24

Plate: Plate_202_B24

AHC0AAA211YG08

Plate: Plate_211_G08

AHC0AAA217YM14

Plate: Plate_217_M14

AHC0AAA218YI23

Plate: Plate_218_I23

AHC0AAA218YJ23

Plate: Plate_218_J23

AHC0AAA220YP06

Plate: Plate_220_P06

AHC0AAA225YJ19

Plate: Plate_225_J19

AHC0AAA236YD12

Plate: Plate_236_D12

AHC0AAA237YB24

Plate: Plate_237_B24

AHC0AAA243YP09

Plate: Plate_243_P09

AHC0AAA249YD11

Plate: Plate_249_D11

AHC0AAA253YJ05

Plate: Plate_253_J05

AHC0AAA260YB11

Plate: Plate_260_B11

AHC0AAA263YD08

Plate: Plate_263_D08

AHC0AAA39YM10

Plate: Plate_39_M10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom Pfam RNA recognition motif domain

GOSlim

17 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
zinc ion binding Blast molecular function
nuclear speck Blast cellular component
macromolecular complex Blast cellular component
metal ion binding Blast molecular function
intracellular part Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nucleoplasm part Blast cellular component
transcription coactivator activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription cofactor activity Hs molecular function 125 4.32e-32
nucleic acid binding Hs molecular function 137 4.79e-38
RNA binding Hs molecular function 137 4.79e-38
mRNA binding Hs molecular function 137 4.79e-38
mRNA 3'-UTR binding Hs molecular function 137 4.79e-38
protein binding Hs molecular function 137 4.79e-38
nucleus Hs cellular component 137 4.79e-38
nucleoplasm Hs cellular component 137 4.79e-38
transcription factor complex Hs cellular component 125 4.32e-32
nucleolus Hs cellular component 137 4.79e-38
cytoplasm Hs cellular component 137 4.79e-38
cytosol Hs cellular component 137 4.79e-38
zinc ion binding Hs molecular function 137 4.79e-38
cytoplasmic stress granule Hs cellular component 137 4.79e-38
mediator complex Hs cellular component 125 4.32e-32
nuclear speck Hs cellular component 137 4.79e-38
cyclin binding Hs molecular function 137 4.79e-38
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 125 4.32e-32
intracellular ribonucleoprotein complex Hs cellular component 125 4.32e-32
protein binding, bridging Hs molecular function 125 4.32e-32
macromolecular complex Hs cellular component 137 5.82e-38
miRNA binding Hs molecular function 137 4.79e-38
metal ion binding Hs molecular function 137 4.79e-38
pre-mRNA intronic binding Hs molecular function 137 4.79e-38
pre-mRNA intronic pyrimidine-rich binding Hs molecular function 137 4.79e-38

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 4.79E-26