Gene Card
Best human hits
TBX19; TBX6; TBXT
Species
Unique Gene ID
Phmamm.g00007005
Gene Model ID
Phmamm.CG.MTP2014.S305.g07005
Location
S305:65738..69567
Transcript Models and Sequences
Phmamm.CG.MTP2014.S305.g07005.01.t
Phmamm.CG.MTP2014.S305.g07005.02.t
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TF_T-box_CS | ProSitePatterns | Transcription factor, T-box, conserved site |
| p53-like_TF_DNA-bd | SUPERFAMILY | p53-like transcription factor, DNA-binding |
| TF_T-box | Pfam | Transcription factor, T-box |
| TF_T-box | ProSiteProfiles | Transcription factor, T-box |
| TF_T-box | PRINTS | Transcription factor, T-box |
| TF_Brachyury | PRINTS | Transcription factor, Brachyury |
| TF_T-box | PANTHER | Transcription factor, T-box |
| TF_T-box | CDD | Transcription factor, T-box |
| TF_T-box | SMART | Transcription factor, T-box |
| T-box_sf | Gene3D | T-box superfamily |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| sequence-specific DNA binding | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| RNA polymerase II regulatory region sequence-specific DNA binding | Blast | molecular function |
| transcription factor binding | Blast | molecular function |
| transcription regulatory region sequence-specific DNA binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| chromatin | Hs | cellular component | 313 | 5.88e-102 |
| nuclear chromatin | Hs | cellular component | 313 | 5.88e-102 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 313 | 5.88e-102 |
| RNA polymerase II distal enhancer sequence-specific DNA binding | Hs | molecular function | 313 | 5.88e-102 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 313 | 5.88e-102 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 283 | 1.99e-90 |
| RNA polymerase II transcription factor binding | Hs | molecular function | 313 | 5.88e-102 |
| RNA polymerase II activating transcription factor binding | Hs | molecular function | 313 | 5.88e-102 |
| enhancer sequence-specific DNA binding | Hs | molecular function | 283 | 1.99e-90 |
| transcriptional repressor activity, RNA polymerase II transcription factor binding | Hs | molecular function | 313 | 5.88e-102 |
| DNA binding | Hs | molecular function | 313 | 5.88e-102 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 313 | 5.88e-102 |
| transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | Hs | molecular function | 313 | 5.88e-102 |
| protein binding | Hs | molecular function | 199 | 2.48e-58 |
| nucleus | Hs | cellular component | 313 | 5.88e-102 |
| cytoplasm | Hs | cellular component | 313 | 5.88e-102 |
| sequence-specific DNA binding | Hs | molecular function | 313 | 5.88e-102 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transcription factor activity, sequence-specific DNA binding | PANTHER | molecular function | 4.8E-136 |
| nucleus | PANTHER | cellular component | 4.8E-136 |
| regulation of transcription, DNA-templated | PANTHER | biological process | 4.8E-136 |
