Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

EIF2A; EIF3B

Species

P.mammillata

Unique Gene ID

Phmamm.g00000124

Gene Model ID

Phmamm.CG.MTP2014.S3.g00124

Location

S3:33948..38147

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S3.g00124.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA13YO14

Plate: Plate_13_O14

AHC0AAA15YI16

Plate: Plate_15_I16

AHC0AAA23YN04

Plate: Plate_23_N04

AHC0AAA7YC21

Plate: Plate_7_C21

AHC0AAA9YN16

Plate: Plate_9_N16

AHC0AAA48YF06

Plate: Plate_48_F06

AHC0AAA59YO05

Plate: Plate_59_O05

AHC0AAA105YN24

Plate: Plate_105_N24

AHC0AAA120YI23

Plate: Plate_120_I23

AHC0AAA88YD22

Plate: Plate_88_D22

AHC0AAA98YO20

Plate: Plate_98_O20

AHC0AAA182YP06

Plate: Plate_182_P06

AHC0AAA185YH18

Plate: Plate_185_H18

AHC0AAA187YL16

Plate: Plate_187_L16

AHC0AAA201YO03

Plate: Plate_201_O03

AHC0AAA232YM10

Plate: Plate_232_M10

AHC0AAA98YO18

Plate: Plate_98_O18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
TIF2A PANTHER Translation initiation factor 2A
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
TIF_beta_prop-like Pfam Translation initiation factor, beta propellor-like domain

GOSlim

20 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
extracellular space Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
translational initiation Orthology biological process
protein phosphorylation Orthology biological process
positive regulation of signal transduction Orthology biological process
extracellular exosome Blast cellular component
regulation of gene expression Orthology biological process
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Orthology cellular component
ribosome Orthology cellular component
signal transduction Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
cellular response to stress Orthology biological process
macromolecular complex binding Orthology molecular function
cell adhesion molecule binding Orthology molecular function

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA binding Hs molecular function
mRNA binding Hs molecular function
translation initiation factor activity Hs molecular function
protein binding Hs molecular function
extracellular space Hs cellular component
cytoplasm Hs cellular component
eukaryotic translation initiation factor 2 complex Hs cellular component
translation Hs biological process
translational initiation Hs biological process
regulation of translation Hs biological process
protein phosphorylation Hs biological process
positive regulation of signal transduction Hs biological process
cytosolic small ribosomal subunit Hs cellular component
SREBP signaling pathway Hs biological process
ribosome assembly Hs biological process
ribosome binding Hs molecular function
cadherin binding Hs molecular function
blood microparticle Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 337 9.76e-111
nucleic acid binding Hs molecular function 74.3 3.80e-14
RNA binding Hs molecular function 74.3 3.80e-14
mRNA binding Hs molecular function 337 9.76e-111
translation initiation factor activity Hs molecular function 337 9.76e-111
protein binding Hs molecular function 337 9.76e-111
extracellular space Hs cellular component 337 9.76e-111
cytoplasm Hs cellular component 337 9.76e-111
cytosol Hs cellular component 74.3 3.80e-14
eukaryotic translation initiation factor 2 complex Hs cellular component 337 9.76e-111
eukaryotic translation initiation factor 3 complex Hs cellular component 74.3 3.80e-14
eukaryotic 43S preinitiation complex Hs cellular component 74.3 3.80e-14
cytosolic small ribosomal subunit Hs cellular component 337 9.76e-111
translation initiation factor binding Hs molecular function 74.3 3.80e-14
protein complex scaffold activity Hs molecular function 74.3 3.80e-14
eukaryotic 48S preinitiation complex Hs cellular component 74.3 3.80e-14
ribosome binding Hs molecular function 337 9.76e-111
cadherin binding Hs molecular function 337 9.76e-111
extracellular exosome Hs cellular component 74.3 3.80e-14
eukaryotic translation initiation factor 3 complex, eIF3m Hs cellular component 74.3 3.80e-14
blood microparticle Hs cellular component 337 9.76e-111

GO (InterProScan)

3 results

GO Term Analysis Type e-value
translation initiation factor activity PANTHER molecular function 7.3E-130
protein binding SUPERFAMILY molecular function 3.48E-9
translational initiation PANTHER biological process 7.3E-130